| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1067663 |
chr6:53796341-54449718 |
Enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
14 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv529158 |
chr6:53796341-54449718 |
Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
14 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv427757 |
chr6:54296552-54507210 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv885889 |
chr6:54339930-54458991 |
Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv885890 |
chr6:54339930-54460646 |
Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv885891 |
chr6:54344853-54425876 |
Enhancers Weak transcription Strong transcription ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv885892 |
chr6:54344853-54458991 |
Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv885893 |
chr6:54344853-54460646 |
Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription
|
TF binding regionChromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
nsv885894 |
chr6:54350048-54452797 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription
|
TF binding regionChromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 10 |
nsv885895 |
chr6:54350048-54456869 |
Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 11 |
nsv885896 |
chr6:54350048-54458991 |
Enhancers Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS
|
TF binding regionChromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 12 |
nsv885897 |
chr6:54350048-54460646 |
Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 13 |
esv1849986 |
chr6:54376524-54441359 |
Weak transcription ZNF genes & repeats Enhancers
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 14 |
nsv885898 |
chr6:54376524-54458991 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 15 |
nsv885899 |
chr6:54400791-54458991 |
Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 16 |
nsv462946 |
chr6:54403797-54440633 |
Weak transcription Enhancers ZNF genes & repeats
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 17 |
nsv603128 |
chr6:54403797-54440633 |
Enhancers ZNF genes & repeats Weak transcription
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 18 |
nsv970041 |
chr6:54407511-54424187 |
Weak transcription ZNF genes & repeats Enhancers
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
Variant overlapped rSNPs/rCNVs (count:18 , 50 per page) page:
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