Variant report

Variant rs542017290
Chromosome Location chr6:31236328-31236329
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:31232600-31236800 Weak transcription Skeletal Muscle Male skeletal muscle
2 chr6:31233200-31236600 Weak transcription HMEC breast
3 chr6:31233200-31238200 Weak transcription Stomach Mucosa stomach
4 chr6:31233200-31238400 Weak transcription Small Intestine intestine
5 chr6:31233600-31236400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr6:31233800-31236400 Weak transcription Breast Myoepithelial Primary Cells Breast
7 chr6:31233800-31236600 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr6:31233800-31236800 Weak transcription Stomach Smooth Muscle stomach
9 chr6:31234000-31236800 Weak transcription Rectal Smooth Muscle rectum
10 chr6:31234000-31237000 Weak transcription Colon Smooth Muscle Colon
11 chr6:31234200-31236600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr6:31234200-31236600 Weak transcription Osteobl bone
13 chr6:31234400-31236400 Weak transcription HUES6 Cell Line embryonic stem cell
14 chr6:31234400-31236800 Weak transcription HUES64 Cell Line embryonic stem cell
15 chr6:31234400-31237000 Weak transcription Ovary ovary
16 chr6:31234600-31236400 Weak transcription HUES48 Cell Line embryonic stem cell
17 chr6:31234600-31236800 Weak transcription Dnd41 blood
18 chr6:31234800-31236400 Weak transcription NHDF-Ad bronchial
19 chr6:31234800-31237400 Weak transcription iPS-15b Cell Line embryonic stem cell
20 chr6:31235000-31236600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr6:31235000-31236600 Weak transcription Right Ventricle heart
22 chr6:31235000-31238600 Weak transcription HSMM muscle
23 chr6:31235200-31236800 Genic enhancers Primary neutrophils fromperipheralblood blood
24 chr6:31235200-31237000 Genic enhancers Primary T cells from cord blood blood
25 chr6:31235200-31237000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr6:31235200-31238400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr6:31235400-31236400 Genic enhancers Primary T cells fromperipheralblood blood
28 chr6:31235400-31236400 Genic enhancers Primary T helper cells PMA-I stimulated --
29 chr6:31235400-31236600 Genic enhancers Primary T regulatory cells fromperipheralblood blood
30 chr6:31235400-31236800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr6:31235400-31236800 Strong transcription Sigmoid Colon Sigmoid Colon
32 chr6:31235400-31237400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr6:31235400-31237800 Strong transcription iPS DF 6.9 Cell Line embryonic stem cell
34 chr6:31235600-31236400 Genic enhancers Primary T killer naive cells fromperipheralblood blood
35 chr6:31235600-31236400 Enhancers Fetal Intestine Large intestine
36 chr6:31235600-31236400 Enhancers HepG2 liver
37 chr6:31235600-31236600 Strong transcription Monocytes-CD14+_RO01746 blood
38 chr6:31235600-31236800 Weak transcription iPS-20b Cell Line embryonic stem cell
39 chr6:31235600-31236800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr6:31235600-31236800 Genic enhancers Primary T helper cells fromperipheralblood blood
41 chr6:31235600-31236800 Strong transcription Skeletal Muscle Female skeletal muscle
42 chr6:31235600-31236800 Weak transcription NHEK skin
43 chr6:31235600-31237000 Genic enhancers Primary T helper memory cells from peripheral blood 2 blood
44 chr6:31235600-31237000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
45 chr6:31235600-31237000 Strong transcription Liver Liver
46 chr6:31235600-31237000 Genic enhancers Rectal Mucosa Donor 31 rectum
47 chr6:31235600-31237200 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
48 chr6:31235600-31237200 Genic enhancers Rectal Mucosa Donor 29 rectum
49 chr6:31235600-31237400 Strong transcription Primary hematopoietic stem cells blood
50 chr6:31235600-31237400 Strong transcription Left Ventricle heart

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