Variant report

Variant rs542601946
Chromosome Location chr6:163835208-163835209
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:163832600-163841400 Active TSS Skeletal Muscle Male skeletal muscle
2 chr6:163833000-163837200 Active TSS Brain Cingulate Gyrus brain
3 chr6:163833000-163843400 Active TSS Brain Inferior Temporal Lobe brain
4 chr6:163833200-163836200 Active TSS Cortex derived primary cultured neurospheres brain
5 chr6:163833200-163837200 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr6:163833200-163841000 Active TSS Fetal Muscle Leg muscle
7 chr6:163833200-163842000 Active TSS HSMMtube muscle
8 chr6:163833400-163835400 Active TSS Brain Angular Gyrus brain
9 chr6:163833400-163835600 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
10 chr6:163833400-163836200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
11 chr6:163833400-163838600 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr6:163833400-163838600 Active TSS Fetal Kidney kidney
13 chr6:163833400-163838800 Active TSS ES-I3 Cell Line embryonic stem cell
14 chr6:163833400-163839400 Active TSS HUES6 Cell Line embryonic stem cell
15 chr6:163833400-163839400 Active TSS NH-A brain
16 chr6:163833400-163839600 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
17 chr6:163833400-163839800 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr6:163833400-163839800 Active TSS Fetal Muscle Trunk muscle
19 chr6:163833400-163840400 Active TSS Fetal Brain Female brain
20 chr6:163833400-163840600 Active TSS Skeletal Muscle Female skeletal muscle
21 chr6:163833400-163841400 Active TSS Stomach Smooth Muscle stomach
22 chr6:163833400-163841400 Active TSS NHLF lung
23 chr6:163833400-163843600 Active TSS Right Ventricle heart
24 chr6:163833600-163835400 Active TSS Brain Anterior Caudate brain
25 chr6:163833600-163836200 Active TSS Brain Germinal Matrix brain
26 chr6:163833600-163837200 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
27 chr6:163833600-163838000 Active TSS Primary T cells fromperipheralblood blood
28 chr6:163833600-163838400 Active TSS Placenta Placenta
29 chr6:163833600-163838600 Active TSS NHDF-Ad bronchial
30 chr6:163833600-163838800 Bivalent/Poised TSS Fetal Intestine Large intestine
31 chr6:163833600-163838800 Active TSS Hela-S3 cervix
32 chr6:163833600-163839400 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
33 chr6:163833600-163839600 Active TSS ES-UCSF4 Cell Line embryonic stem cell
34 chr6:163833600-163840000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr6:163833600-163840400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr6:163833600-163841400 Active TSS Brain Dorsolateral Prefrontal Cortex brain
37 chr6:163833600-163841400 Active TSS HSMM muscle
38 chr6:163833600-163842400 Active TSS Psoas Muscle Psoas
39 chr6:163833600-163843000 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
40 chr6:163833800-163838000 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr6:163833800-163838000 Active TSS H9 Cell Line embryonic stem cell
42 chr6:163833800-163838200 Active TSS Rectal Smooth Muscle rectum
43 chr6:163833800-163838200 Active TSS Monocytes-CD14+_RO01746 blood
44 chr6:163833800-163838600 Active TSS Adipose Nuclei Adipose
45 chr6:163833800-163838600 Active TSS Colon Smooth Muscle Colon
46 chr6:163833800-163838800 Active TSS H1 Cell Line embryonic stem cell
47 chr6:163833800-163838800 Active TSS Aorta Aorta
48 chr6:163833800-163839800 Active TSS Left Ventricle heart
49 chr6:163833800-163840000 Active TSS Pancreatic Islets Pancreatic Islet
50 chr6:163833800-163840800 Active TSS K562 blood

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