No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs565579449 |
chr6:163834858-163834859 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs528185543 |
chr6:163834874-163834875 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs551212707 |
chr6:163834875-163834876 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs571039005 |
chr6:163834892-163834893 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs540052622 |
chr6:163834900-163834901 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs556865461 |
chr6:163834903-163834904 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs570368551 |
chr6:163834905-163834906 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs535443297 |
chr6:163834934-163834935 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs555726514 |
chr6:163834987-163834988 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs572399188 |
chr6:163835004-163835005 |
Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs541493057 |
chr6:163835006-163835007 |
Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs561418717 |
chr6:163835024-163835025 |
Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs577384086 |
chr6:163835030-163835031 |
Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs529001218 |
chr6:163835052-163835053 |
Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs543214159 |
chr6:163835088-163835089 |
Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs563200646 |
chr6:163835128-163835129 |
Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs529177785 |
chr6:163835138-163835139 |
Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs542601946 |
chr6:163835208-163835209 |
Active TSS Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs559276640 |
chr6:163835316-163835317 |
Active TSS Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs113414202 |
chr6:163835348-163835349 |
Active TSS Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs528106531 |
chr6:163835395-163835396 |
Active TSS Weak transcription Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs185979423 |
chr6:163835414-163835415 |
Active TSS Weak transcription Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs551419604 |
chr6:163835928-163835929 |
Active TSS Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs532554431 |
chr6:163836058-163836059 |
Active TSS Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs571385309 |
chr6:163836073-163836074 |
Active TSS Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs570868172 |
chr6:163836086-163836087 |
Active TSS Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs533520219 |
chr6:163836153-163836154 |
Active TSS Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs374822775 |
chr6:163836198-163836199 |
Active TSS Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs550409572 |
chr6:163836201-163836202 |
Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs201861532 |
chr6:163836202-163836203 |
Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs536146655 |
chr6:163836204-163836205 |
Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs372310908 |
chr6:163836210-163836211 |
Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs555814946 |
chr6:163836267-163836268 |
Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs201009777 |
chr6:163836270-163836271 |
Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs200474822 |
chr6:163836276-163836277 |
Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs202064822 |
chr6:163836341-163836342 |
Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs143702784 |
chr6:163836360-163836361 |
Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs537188218 |
chr6:163836372-163836373 |
Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs369658575 |
chr6:163836374-163836375 |
Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs2757578 |
chr6:163836376-163836377 |
Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
41 |
rs199723496 |
chr6:163836391-163836392 |
Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs369372840 |
chr6:163836398-163836399 |
Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs373209224 |
chr6:163836401-163836402 |
Active TSS Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs376175617 |
chr6:163836409-163836410 |
Active TSS Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs572768018 |
chr6:163836432-163836433 |
Active TSS Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs370301190 |
chr6:163836436-163836437 |
Active TSS Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs551208960 |
chr6:163836439-163836440 |
Active TSS Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs550487898 |
chr6:163836481-163836482 |
Active TSS Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs564934057 |
chr6:163836507-163836508 |
Active TSS Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|