Variant report

Variant	rs563200646
Chromosome Location	chr6:163835128-163835129
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CHD2	chr6:163834276-163835298	K562	blood:	n/a	n/a
2	POLR2A	chr6:163833865-163837731	GM18505	blood:	n/a	n/a
3	MAX	chr6:163834315-163835306	GM12878	blood:	n/a	chr6:163835111-163835124 chr6:163835113-163835122
4	CHD2	chr6:163834334-163835841	Hela-S3	cervix:	n/a	n/a
5	CEBPB	chr6:163834232-163835874	HepG2	liver:	n/a	n/a
6	POLR2A	chr6:163834058-163835953	HL-60	blood:	n/a	n/a
7	FOXM1	chr6:163834187-163835359	GM12878	blood:	n/a	n/a
8	POLR2A	chr6:163833895-163835294	PANC-1	pancreas:	n/a	n/a
9	POLR2A	chr6:163834123-163836009	K562	blood:	n/a	n/a
10	TCF12	chr6:163834969-163835204	H1-hESC	embryonic stem cell:	n/a	n/a
11	MAX	chr6:163834426-163835291	K562	blood:	n/a	chr6:163835111-163835124 chr6:163835113-163835122
12	MAX	chr6:163834014-163835325	HepG2	liver:	n/a	chr6:163835111-163835124 chr6:163835113-163835122
13	MYC	chr6:163834091-163835306	K562	blood:	n/a	chr6:163835111-163835124 chr6:163835113-163835122
14	USF1	chr6:163834933-163835299	HepG2	liver:	n/a	chr6:163835112-163835123
15	POLR2A	chr6:163834316-163835267	HepG2	liver:	n/a	n/a
16	ZMIZ1	chr6:163834008-163835255	K562	blood:	n/a	n/a
17	MYBL2	chr6:163834065-163835309	HepG2	liver:	n/a	n/a
18	GATA3	chr6:163834262-163835197	A549	lung:	n/a	n/a
19	USF2	chr6:163834414-163835316	GM12878	blood:	n/a	chr6:163835111-163835122
20	CEBPB	chr6:163834965-163835311	Hela-S3	cervix:	n/a	n/a
21	USF1	chr6:163834806-163835268	A549	lung:	n/a	chr6:163835112-163835123
22	JUND	chr6:163834896-163835128	H1-hESC	embryonic stem cell:	n/a	n/a
23	ZNF263	chr6:163834101-163835247	HEK293-T-REx	kidney:	n/a	n/a
24	PML	chr6:163835067-163835236	GM12878	blood:	n/a	n/a
25	IRF1	chr6:163834364-163835268	K562	blood:	n/a	chr6:163835050-163835064
26	HEY1	chr6:163834128-163835578	HepG2	liver:	n/a	chr6:163835234-163835249 chr6:163834851-163834866
27	USF1	chr6:163834959-163835351	A549	lung:	n/a	chr6:163835112-163835123
28	TEAD4	chr6:163835063-163835348	H1-hESC	embryonic stem cell:	n/a	n/a
29	ATF3	chr6:163834904-163835255	HepG2	liver:	n/a	n/a
30	CEBPB	chr6:163834947-163835336	IMR90	lung:	n/a	n/a
31	TAF1	chr6:163834612-163835372	ECC-1	luminal epithelium:	n/a	n/a
32	POLR2A	chr6:163834145-163835458	GM12892	blood:	n/a	n/a
33	TAL1	chr6:163834027-163835289	K562	blood:	n/a	n/a
34	USF1	chr6:163834768-163835458	K562	blood:	n/a	chr6:163835112-163835123
35	PML	chr6:163834066-163835277	K562	blood:	n/a	n/a
36	TBL1XR1	chr6:163834293-163835272	GM12878	blood:	n/a	n/a
37	POLR2A	chr6:163834444-163836378	Raji	blood:	n/a	n/a
38	E2F1	chr6:163834440-163836040	Hela-S3	cervix:	n/a	chr6:163835761-163835771 chr6:163835077-163835086 chr6:163835287-163835296 chr6:163834818-163834830
39	POLR2A	chr6:163834197-163836001	HUVEC	blood vessel:	n/a	n/a
40	RELA	chr6:163833909-163836016	GM12891	blood:	n/a	chr6:163834879-163834888 chr6:163834879-163834888
41	SIN3A	chr6:163834086-163835309	H1-hESC	embryonic stem cell:	n/a	chr6:163834441-163834454 chr6:163834616-163834630 chr6:163834834-163834845 chr6:163835112-163835121
42	RCOR1	chr6:163833833-163835293	K562	blood:	n/a	n/a
43	POLR2A	chr6:163833436-163836080	HUVEC	blood vessel:	n/a	n/a
44	POLR2A	chr6:163834529-163835277	H1-hESC	embryonic stem cell:	n/a	n/a
45	TCF12	chr6:163834716-163835256	ECC-1	luminal epithelium:	n/a	n/a
46	SP1	chr6:163834746-163835288	GM12878	blood:	n/a	chr6:163834941-163834950 chr6:163835051-163835061 chr6:163835051-163835061
47	EP300	chr6:163834179-163835276	GM12878	blood:	n/a	n/a
48	BHLHE40	chr6:163833621-163835329	GM12878	blood:	n/a	n/a
49	E2F6	chr6:163834187-163836475	K562	blood:	n/a	chr6:163835761-163835771 chr6:163835077-163835086 chr6:163835287-163835296 chr6:163834818-163834830 chr6:163836442-163836454
50	SP1	chr6:163834762-163835278	A549	lung:	n/a	chr6:163834941-163834950 chr6:163835051-163835061 chr6:163835051-163835061

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:163835117-163835167	MCF10A-Er-Src	breast:	n/a
2	chr6:163835117-163835167	HCPEpiC	choroid plexus:	n/a
3	chr6:163835117-163835167	HCF	heart:	n/a
4	chr6:163835117-163835167	AG09309	skin:	n/a
5	chr6:163835117-163835167	SK-N-SH	brain:	n/a
6	chr6:163835117-163835167	HRCEpiC	kidney:	n/a
7	chr6:163835117-163835167	ProgFib	skin:	n/a
8	chr6:163835117-163835167	H1-hESC	embryonic stem cell:	embryo
9	chr6:163835117-163835167	PFSK-1	brain:	n/a
10	chr6:163835117-163835167	NT2-D1	testis:	n/a
11	chr6:163835117-163835167	GM12891	blood:	n/a
12	chr6:163835117-163835167	IMR90	lung:	fetal
13	chr6:163835117-163835167	SK-N-SH_RA	brain:	n/a
14	chr6:163835117-163835167	AG09319	gingival:	n/a
15	chr6:163835117-163835167	Jurkat	blood:	n/a
16	chr6:163835117-163835167	HIPEpiC	eye:	n/a
17	chr6:163835117-163835167	GM12892	blood:	n/a
18	chr6:163835117-163835167	U87	brain:	n/a
19	chr6:163835117-163835167	PANC-1	pancreas:	n/a
20	chr6:163835117-163835167	BE2_C	brain:	n/a
21	chr6:163835117-163835167	HPAEpiC	pulmonary alveolar:	n/a
22	chr6:163835117-163835167	Hela-S3	cervix:	n/a
23	chr6:163835117-163835167	ovcar-3	ovarian:	n/a
24	chr6:163835117-163835167	HEEpiC	esophagus:	n/a
25	chr6:163835117-163835167	A549	lung:	n/a
26	chr6:163835117-163835167	T-47D	breast:	n/a
27	chr6:163835117-163835167	PrEC	prostate:	n/a
28	chr6:163835117-163835167	HepG2	liver:	n/a
29	chr6:163835117-163835167	HEK293	kidney:	embryo
30	chr6:163835117-163835167	HCM	heart:	n/a
31	chr6:163835117-163835167	Caco-2	colon:	n/a
32	chr6:163835117-163835167	SK-N-MC	brain:	n/a
33	chr6:163835117-163835167	HUVEC	blood vessel:	n/a
34	chr6:163835117-163835167	NHDF-neo	bronchial:	n/a
35	chr6:163835117-163835167	HAEpiC	amniotic membrane:	n/a
36	chr6:163835117-163835167	NHBE	bronchial:	n/a
37	chr6:163835117-163835167	Hepatocyte	liver:	n/a
38	chr6:163835117-163835167	GM19239	blood:	n/a
39	chr6:163835117-163835167	HNPCEpiC	eye:	n/a
40	chr6:163835117-163835167	SKMC	muscle:	n/a
41	chr6:163835117-163835167	HCT-116	colon:	n/a
42	chr6:163835117-163835167	AG04450	lung:	fetal
43	chr6:163835117-163835167	AG10803	skin:	n/a
44	chr6:163835117-163835167	K562	blood:	n/a
45	chr6:163835117-163835167	LNCaP	prostate:	n/a
46	chr6:163835117-163835167	SAEC	small airway:	n/a
47	chr6:163835117-163835167	CMK	blood:	n/a
48	chr6:163835117-163835167	HRPEpiC	eye:	n/a
49	chr6:163835117-163835167	HMEC	breast:	n/a
50	chr6:163835117-163835167	BJ	skin:	n/a

No.	Distal block	Cell Line	Cell type
1	chr6:163834433..163837014-chr6:163986395..163988827,2	K562	blood:
2	chr6:163833988..163836212-chr6:163848529..163850044,2	MCF-7	breast:
3	chr6:163832850..163838270-chr6:163950827..163956360,5	K562	blood:

Variant related genes	Relation type
CAHM	TF binding region
QKI	TF binding region
QKI	CpG island
CAHM	CpG island
ENSG00000112531	Chromatin interaction

Extended variants
information (count: 48 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:48 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv932127	chr6:163000261-163950870	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
2	nsv534621	chr6:163731741-163950870	Bivalent/Poised TSS Enhancers Flanking Active TSS Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
3	esv1791729	chr6:163814557-163836689	Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	esv1839403	chr6:163822296-163835490	Weak transcription Flanking Active TSS Active TSS Enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
5	esv1793461	chr6:163822296-163836634	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
6	esv1794611	chr6:163822296-163836689	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
7	esv1796475	chr6:163822296-163836689	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
8	esv1797016	chr6:163822296-163836689	Active TSS Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
9	esv1801202	chr6:163822296-163836689	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
10	esv1801861	chr6:163822296-163836689	Active TSS Weak transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
11	nsv605193	chr6:163824864-163835490	Flanking Active TSS Weak transcription Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
12	nsv605194	chr6:163824864-163836293	Weak transcription Enhancers Bivalent/Poised TSS Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
13	nsv605195	chr6:163824864-163836634	Flanking Active TSS Weak transcription Enhancers Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
14	esv3388703	chr6:163833387-163836135	Bivalent/Poised TSS Flanking Active TSS Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
15	esv3335151	chr6:163833462-163838560	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
16	esv3439007	chr6:163833987-163837835	Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
17	esv1797109	chr6:163834147-163908115	Genic enhancers Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
18	esv3438634	chr6:163834437-163837310	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
19	esv11489	chr6:163834591-163836760	Active TSS Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Weak transcription Enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
20	nsv605196	chr6:163834755-163835439	Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
21	nsv605197	chr6:163834755-163835845	Active TSS Bivalent/Poised TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
22	esv1792149	chr6:163834755-163836634	Active TSS Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
23	esv1797165	chr6:163834755-163836634	Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
24	esv1802273	chr6:163834755-163836634	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
25	nsv605198	chr6:163834755-163836634	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
26	esv1798112	chr6:163834755-163836689	Transcr. at gene 5' and 3' Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
27	esv1799511	chr6:163834755-163836689	Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
28	esv1833770	chr6:163834755-163836689	Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
29	esv1834482	chr6:163834755-163836689	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription Flanking Active TSS ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
30	esv1836788	chr6:163834755-163836689	Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
31	esv1843883	chr6:163834755-163836689	Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Weak transcription Enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
32	esv1845420	chr6:163834755-163836689	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
33	nsv605199	chr6:163834755-163836689	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
34	nsv605200	chr6:163834857-163835490	Active TSS Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
35	nsv605201	chr6:163834857-163835845	Active TSS Bivalent/Poised TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
36	nsv605202	chr6:163834857-163836534	Active TSS Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
37	nsv605203	chr6:163834857-163836634	Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
38	esv1845007	chr6:163834857-163836689	Flanking Bivalent TSS/Enh Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
39	esv3397634	chr6:163834862-163837660	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS ZNF genes & repeats Enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
40	esv1811004	chr6:163834909-163836634	Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
41	nsv605204	chr6:163834909-163836689	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
42	esv1809559	chr6:163834909-163838794	Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers ZNF genes & repeats Weak transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
43	esv1819183	chr6:163834909-163838794	Active TSS Weak transcription ZNF genes & repeats Enhancers Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
44	esv1829454	chr6:163834909-163838794	Weak transcription Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
45	esv1841776	chr6:163834909-163838794	Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
46	esv1851449	chr6:163834909-163838794	Active TSS Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
47	nsv605205	chr6:163834909-163838794	Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
48	nsv605206	chr6:163835074-163836634	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:163832600-163841400	Active TSS	Skeletal Muscle Male	skeletal muscle
2	chr6:163832800-163835200	Active TSS	Brain Hippocampus Middle	brain
3	chr6:163833000-163837200	Active TSS	Brain Cingulate Gyrus	brain
4	chr6:163833000-163843400	Active TSS	Brain Inferior Temporal Lobe	brain
5	chr6:163833200-163835200	Active TSS	A549	lung
6	chr6:163833200-163836200	Active TSS	Cortex derived primary cultured neurospheres	brain
7	chr6:163833200-163837200	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr6:163833200-163841000	Active TSS	Fetal Muscle Leg	muscle
9	chr6:163833200-163842000	Active TSS	HSMMtube	muscle
10	chr6:163833400-163835400	Active TSS	Brain Angular Gyrus	brain
11	chr6:163833400-163835600	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
12	chr6:163833400-163836200	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
13	chr6:163833400-163838600	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
14	chr6:163833400-163838600	Active TSS	Fetal Kidney	kidney
15	chr6:163833400-163838800	Active TSS	ES-I3 Cell Line	embryonic stem cell
16	chr6:163833400-163839400	Active TSS	HUES6 Cell Line	embryonic stem cell
17	chr6:163833400-163839400	Active TSS	NH-A	brain
18	chr6:163833400-163839600	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
19	chr6:163833400-163839800	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
20	chr6:163833400-163839800	Active TSS	Fetal Muscle Trunk	muscle
21	chr6:163833400-163840400	Active TSS	Fetal Brain Female	brain
22	chr6:163833400-163840600	Active TSS	Skeletal Muscle Female	skeletal muscle
23	chr6:163833400-163841400	Active TSS	Stomach Smooth Muscle	stomach
24	chr6:163833400-163841400	Active TSS	NHLF	lung
25	chr6:163833400-163843600	Active TSS	Right Ventricle	heart
26	chr6:163833600-163835200	Active TSS	Duodenum Smooth Muscle	Duodenum
27	chr6:163833600-163835400	Active TSS	Brain Anterior Caudate	brain
28	chr6:163833600-163836200	Active TSS	Brain Germinal Matrix	brain
29	chr6:163833600-163837200	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
30	chr6:163833600-163838000	Active TSS	Primary T cells fromperipheralblood	blood
31	chr6:163833600-163838400	Active TSS	Placenta	Placenta
32	chr6:163833600-163838600	Active TSS	NHDF-Ad	bronchial
33	chr6:163833600-163838800	Bivalent/Poised TSS	Fetal Intestine Large	intestine
34	chr6:163833600-163838800	Active TSS	Hela-S3	cervix
35	chr6:163833600-163839400	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
36	chr6:163833600-163839600	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
37	chr6:163833600-163840000	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
38	chr6:163833600-163840400	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
39	chr6:163833600-163841400	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
40	chr6:163833600-163841400	Active TSS	HSMM	muscle
41	chr6:163833600-163842400	Active TSS	Psoas Muscle	Psoas
42	chr6:163833600-163843000	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
43	chr6:163833800-163835200	Active TSS	Placenta Amnion	Placenta Amnion
44	chr6:163833800-163838000	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
45	chr6:163833800-163838000	Active TSS	H9 Cell Line	embryonic stem cell
46	chr6:163833800-163838200	Active TSS	Rectal Smooth Muscle	rectum
47	chr6:163833800-163838200	Active TSS	Monocytes-CD14+_RO01746	blood
48	chr6:163833800-163838600	Active TSS	Adipose Nuclei	Adipose
49	chr6:163833800-163838600	Active TSS	Colon Smooth Muscle	Colon
50	chr6:163833800-163838800	Active TSS	H1 Cell Line	embryonic stem cell

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