Variant report

Variant	rs543036200
Chromosome Location	chr6:31795322-31795323
allele	-/CT
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	SPI1	chr6:31795104-31795344	GM12878	blood:	n/a	chr6:31795271-31795284
2	POLR2A	chr6:31794527-31795791	K562	blood:	n/a	n/a
3	TAF7	chr6:31795296-31795745	H1-hESC	embryonic stem cell:	n/a	n/a
4	POLR2A	chr6:31794273-31795825	HUVEC	blood vessel:	n/a	n/a
5	POLR2A	chr6:31794423-31796299	PANC-1	pancreas:	n/a	n/a
6	PAX5	chr6:31795145-31795473	GM12878	blood:	n/a	n/a
7	POLR2A	chr6:31794567-31795779	GM18951	blood:	n/a	n/a
8	TAF1	chr6:31794587-31795778	K562	blood:	n/a	n/a
9	KAP1	chr6:31794527-31795579	U2OS	brain:	n/a	n/a
10	ARID3A	chr6:31795225-31795631	HepG2	liver:	n/a	n/a
11	PML	chr6:31794264-31795805	K562	blood:	n/a	n/a
12	ELF1	chr6:31795033-31795737	HepG2	liver:	n/a	n/a
13	CHD2	chr6:31794588-31795732	Hela-S3	cervix:	n/a	n/a
14	CEBPZ	chr6:31795322-31795518	HepG2	liver:	n/a	n/a
15	ETS1	chr6:31794270-31795803	K562	blood:	n/a	n/a
16	PML	chr6:31795267-31795750	MCF-7	breast:	n/a	n/a
17	SIN3AK20	chr6:31794252-31795861	MCF-7	breast:	n/a	n/a
18	STAT3	chr6:31794590-31795656	MCF10A-Er-Src	breast:	n/a	chr6:31795273-31795285
19	RCOR1	chr6:31794341-31795599	GM12878	blood:	n/a	n/a
20	POLR2A	chr6:31795297-31795751	GM12891	blood:	n/a	n/a
21	EP300	chr6:31794927-31795708	HepG2	liver:	n/a	n/a
22	MYBL2	chr6:31794700-31795909	HepG2	liver:	n/a	n/a
23	POLR2A	chr6:31794558-31795788	HUVEC	blood vessel:	n/a	n/a
24	YY1	chr6:31794916-31795752	K562	blood:	n/a	n/a
25	POLR2A	chr6:31795257-31795784	GM12892	blood:	n/a	n/a
26	GTF2F1	chr6:31794391-31795759	K562	blood:	n/a	n/a
27	RFX5	chr6:31794633-31795688	Hela-S3	cervix:	n/a	chr6:31795444-31795453 chr6:31795360-31795369 chr6:31795238-31795253
28	RFX5	chr6:31794705-31795693	K562	blood:	n/a	chr6:31795444-31795453 chr6:31795360-31795369 chr6:31795238-31795253
29	JUND	chr6:31795299-31795782	A549	lung:	n/a	chr6:31795359-31795368 chr6:31795381-31795390
30	TBL1XR1	chr6:31794375-31795813	K562	blood:	n/a	n/a
31	GABPA	chr6:31794970-31795783	K562	blood:	n/a	n/a
32	POLR2A	chr6:31795154-31796345	HepG2	liver:	n/a	n/a
33	SP1	chr6:31794321-31795719	H1-hESC	embryonic stem cell:	n/a	chr6:31795269-31795279 chr6:31795269-31795279 chr6:31795434-31795455 chr6:31794753-31794765 chr6:31795350-31795371 chr6:31795378-31795392 chr6:31794754-31794763 chr6:31794750-31794764
34	POLR2A	chr6:31794442-31795767	Hela-S3	cervix:	n/a	n/a
35	IRF3	chr6:31795229-31795545	HepG2	liver:	n/a	n/a
36	HDAC2	chr6:31794360-31795774	K562	blood:	n/a	n/a
37	SP1	chr6:31794548-31795865	K562	blood:	n/a	chr6:31795269-31795279 chr6:31795269-31795279 chr6:31795434-31795455 chr6:31794753-31794765 chr6:31795350-31795371 chr6:31795378-31795392 chr6:31794754-31794763 chr6:31794750-31794764
38	POLR2A	chr6:31794808-31795403	H1-neurons	neurons:	n/a	n/a
39	POLR2A	chr6:31794679-31796341	GM12891	blood:	n/a	n/a
40	IRF1	chr6:31794413-31795771	K562	blood:	n/a	chr6:31794949-31794969 chr6:31794753-31794767
41	BHLHE40	chr6:31794646-31795591	GM12878	blood:	n/a	n/a
42	TAF1	chr6:31794464-31796026	H1-hESC	embryonic stem cell:	n/a	n/a
43	POLR2A	chr6:31795226-31796458	A549	lung:	n/a	n/a
44	ZMIZ1	chr6:31794446-31795741	K562	blood:	n/a	n/a
45	FOSL2	chr6:31795316-31795786	A549	lung:	n/a	chr6:31795359-31795368 chr6:31795381-31795390
46	SP4	chr6:31794618-31795694	H1-hESC	embryonic stem cell:	n/a	n/a
47	FOXA1	chr6:31794604-31795398	T-47D	breast:	n/a	chr6:31794849-31794864
48	POLR2A	chr6:31794558-31795788	HL-60	blood:	n/a	n/a
49	EP300	chr6:31794329-31795819	ECC-1	luminal epithelium:	n/a	chr6:31794745-31794761
50	NFYB	chr6:31794693-31795684	K562	blood:	n/a	chr6:31795357-31795372 chr6:31795441-31795456 chr6:31795361-31795373 chr6:31795360-31795370 chr6:31795079-31795093 chr6:31795444-31795454 chr6:31795358-31795372 chr6:31795357-31795372 chr6:31795359-31795374 chr6:31795445-31795457 chr6:31795441-31795456

No.	Distal block	Cell Line	Cell type
1	chr6:31632509..31634091-chr6:31794981..31797016,2	MCF-7	breast:
2	chr6:31646374..31649912-chr6:31794618..31797680,6	MCF-7	breast:
3	chr19:50380060..50380616-chr6:31795080..31795682,2	Hela-S3	cervix:
4	chr6:31793170..31796834-chr6:31863715..31868848,6	K562	blood:
5	chr6:31794986..31795591-chr6:31830132..31830996,2	K562	blood:
6	chr6:31737226..31750413-chr6:31786206..31805473,50	MCF-7	breast:
7	chr6:31508088..31512302-chr6:31792582..31797881,5	K562	blood:
8	chr16:87425636..87426576-chr6:31795079..31795938,2	Hela-S3	cervix:
9	chr6:31794734..31796775-chr6:31868219..31871084,2	MCF-7	breast:
10	chr6:31508352..31511076-chr6:31794765..31796870,2	MCF-7	breast:
11	chr6:31795239..31795756-chr7:27779005..27779583,2	Hela-S3	cervix:
12	chr6:31684129..31686897-chr6:31793349..31796953,3	MCF-7	breast:
13	chr6:31794061..31796965-chr6:32094661..32097719,3	K562	blood:
14	chr6:31793612..31800139-chr6:31830250..31833240,9	K562	blood:
15	chr16:89988437..89990274-chr6:31795215..31797917,2	MCF-7	breast:
16	chr6:31794692..31795467-chr7:32996980..32997822,2	Hela-S3	cervix:
17	chr6:31610323..31613172-chr6:31793267..31795561,2	MCF-7	breast:
18	chr6:31782320..31783797-chr6:31794894..31795956,19	Hela-S3	cervix:
19	chr6:31794807..31796884-chr6:31844966..31847954,2	MCF-7	breast:
20	chr6:31706679..31708956-chr6:31795250..31798080,2	MCF-7	breast:
21	chr6:31794009..31796794-chr6:31937769..31941181,3	K562	blood:
22	chr6:31619174..31622035-chr6:31794476..31797735,3	MCF-7	breast:
23	chr6:31793907..31797035-chr6:31916814..31918857,3	K562	blood:
24	chr6:31743287..31747076-chr6:31793437..31796925,5	MCF-7	breast:
25	chr6:31508345..31511059-chr6:31794031..31797026,5	K562	blood:
26	chr6:31792517..31796452-chr6:31911867..31914768,3	MCF-7	breast:
27	chr6:31647892..31650324-chr6:31793249..31795639,4	MCF-7	breast:
28	chr10:38146501..38147130-chr6:31795044..31795963,2	Hela-S3	cervix:
29	chr6:31795039..31796009-chr6:33175540..33176385,2	Hela-S3	cervix:
30	chr6:31793367..31797001-chr6:32936441..32941447,5	MCF-7	breast:
31	chr1:116518929..116519531-chr6:31794722..31795650,2	Hela-S3	cervix:
32	chr6:31795132..31795947-chr9:132245472..132246461,2	Hela-S3	cervix:
33	chr6:31698357..31701391-chr6:31793671..31797057,3	MCF-7	breast:
34	chr5:111496508..111497358-chr6:31795058..31795974,2	NB4	blood:
35	chr6:31782709..31783766-chr6:31794789..31796004,3	NB4	blood:
36	chr6:31782799..31783519-chr6:31795186..31795913,7	MCF-7	breast:
37	chr6:31793544..31795489-chr6:31833591..31835312,2	K562	blood:
38	chr6:31794817..31797801-chr6:31829779..31831981,3	K562	blood:
39	chr17:56708769..56709349-chr6:31795029..31795669,2	MCF-7	breast:
40	chr6:31795174..31795954-chrX:23760489..23761485,2	Hela-S3	cervix:
41	chr1:70820419..70821379-chr6:31794911..31795554,2	Hela-S3	cervix:
42	chr20:49347653..49348478-chr6:31794981..31795951,2	MCF-7	breast:
43	chr17:61850800..61851512-chr6:31794673..31795631,2	Hela-S3	cervix:
44	chr16:2014337..2015106-chr6:31795311..31795999,2	Hela-S3	cervix:
45	chr15:30113789..30114693-chr6:31795054..31795835,2	Hela-S3	cervix:
46	chr6:31782095..31783822-chr6:31794892..31795963,5	MCF-7	breast:
47	chr6:31794076..31797070-chr6:31910942..31912443,2	K562	blood:
48	chr14:24898313..24899033-chr6:31795142..31796000,2	Hela-S3	cervix:
49	chr19:1354549..1355226-chr6:31795168..31795781,2	Hela-S3	cervix:
50	chr6:31756951..31764627-chr6:31780500..31799197,32	MCF-7	breast:

Variant related genes	Relation type
HSPA1B	TF binding region
ENSG00000201555	Chromatin interaction
ENSG00000204444	Chromatin interaction
ENSG00000213676	Chromatin interaction
ENSG00000204371	Chromatin interaction
ENSG00000204396	Chromatin interaction
ENSG00000204394	Chromatin interaction
ENSG00000204227	Chromatin interaction
ENSG00000234006	Chromatin interaction
ENSG00000204463	Chromatin interaction
ENSG00000198563	Chromatin interaction
ENSG00000204385	Chromatin interaction
ENSG00000140941	Chromatin interaction
ENSG00000198105	Chromatin interaction
ENSG00000204435	Chromatin interaction
ENSG00000263020	Chromatin interaction
ENSG00000243649	Chromatin interaction
ENSG00000204054	Chromatin interaction
ENSG00000255198	Chromatin interaction
ENSG00000258947	Chromatin interaction
ENSG00000204420	Chromatin interaction
ENSG00000197568	Chromatin interaction
ENSG00000238363	Chromatin interaction
ENSG00000100441	Chromatin interaction
ENSG00000145901	Chromatin interaction
ENSG00000124171	Chromatin interaction
ENSG00000108588	Chromatin interaction
ENSG00000139899	Chromatin interaction
ENSG00000106052	Chromatin interaction
ENSG00000199036	Chromatin interaction
ENSG00000224032	Chromatin interaction
ENSG00000213719	Chromatin interaction
ENSG00000123130	Chromatin interaction
ENSG00000204366	Chromatin interaction
ENSG00000204348	Chromatin interaction
ENSG00000204390	Chromatin interaction
ENSG00000213722	Chromatin interaction
ENSG00000259006	Chromatin interaction
ENSG00000204257	Chromatin interaction
ENSG00000212195	Chromatin interaction
ENSG00000255152	Chromatin interaction
ENSG00000204673	Chromatin interaction
ENSG00000204428	Chromatin interaction
ENSG00000223837	Chromatin interaction
ENSG00000198231	Chromatin interaction
ENSG00000204438	Chromatin interaction
ENSG00000166278	Chromatin interaction
ENSG00000204256	Chromatin interaction
ENSG00000204389	Chromatin interaction
ENSG00000103264	Chromatin interaction
ENSG00000204344	Chromatin interaction
ENSG00000204386	Chromatin interaction
ENSG00000104067	Chromatin interaction
ENSG00000263756	Chromatin interaction
ENSG00000204410	Chromatin interaction
ENSG00000265236	Chromatin interaction
ENSG00000236514	Chromatin interaction
ENSG00000140988	Chromatin interaction
ENSG00000163393	Chromatin interaction
ENSG00000122642	Chromatin interaction
ENSG00000160953	Chromatin interaction

Extended variants
information (count: 45 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:45 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv601609	chr6:31280101-31799786	Active TSS Flanking Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Enhancers Genic enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	332 gene(s)	inside rSNPs	diseases
2	nsv601610	chr6:31280101-31960770	Enhancers Flanking Active TSS Weak transcription Genic enhancers Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	370 gene(s)	inside rSNPs	diseases
3	nsv601628	chr6:31280327-31990098	Weak transcription Transcr. at gene 5' and 3' Active TSS Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	376 gene(s)	inside rSNPs	diseases
4	nsv601629	chr6:31280327-31996185	Strong transcription Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	376 gene(s)	inside rSNPs	diseases
5	nsv601630	chr6:31280327-32011317	Genic enhancers Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	378 gene(s)	inside rSNPs	diseases
6	nsv601631	chr6:31280327-32017540	Genic enhancers Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	378 gene(s)	inside rSNPs	diseases
7	nsv1023939	chr6:31325961-32026747	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	372 gene(s)	inside rSNPs	diseases
8	nsv538188	chr6:31325961-32026747	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	372 gene(s)	inside rSNPs	diseases
9	nsv1021747	chr6:31386219-31907266	Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Enhancers Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	330 gene(s)	inside rSNPs	diseases
10	nsv1033154	chr6:31550614-32009410	Strong transcription Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	326 gene(s)	inside rSNPs	diseases
11	nsv1017945	chr6:31609641-32481240	Genic enhancers Weak transcription Transcr. at gene 5' and 3' Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	322 gene(s)	inside rSNPs	diseases
12	esv3428142	chr6:31615800-31881809	Flanking Active TSS Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	257 gene(s)	inside rSNPs	diseases
13	nsv884426	chr6:31728102-31800868	Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	139 gene(s)	inside rSNPs	diseases
14	nsv884427	chr6:31728102-31802465	Enhancers Flanking Active TSS Active TSS Weak transcription Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	152 gene(s)	inside rSNPs	diseases
15	nsv884428	chr6:31728102-31870326	Enhancers Weak transcription Strong transcription Active TSS Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	162 gene(s)	inside rSNPs	diseases
16	nsv884429	chr6:31730356-31837066	Enhancers Transcr. at gene 5' and 3' Strong transcription Active TSS Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	155 gene(s)	inside rSNPs	diseases
17	nsv884430	chr6:31731881-31800631	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	139 gene(s)	inside rSNPs	diseases
18	nsv462872	chr6:31778272-31864304	Enhancers Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	144 gene(s)	inside rSNPs	diseases
19	nsv601945	chr6:31778272-31864304	Flanking Active TSS Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	144 gene(s)	inside rSNPs	diseases
20	nsv981359	chr6:31779004-31797103	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	111 gene(s)	inside rSNPs	diseases
21	nsv869989	chr6:31779203-31797657	Flanking Active TSS Enhancers Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	114 gene(s)	inside rSNPs	diseases
22	esv3344240	chr6:31783339-31795664	Flanking Active TSS Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	106 gene(s)	inside rSNPs	diseases
23	nsv823504	chr6:31783490-31795322	Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	88 gene(s)	inside rSNPs	diseases
24	nsv884450	chr6:31783527-31797769	Active TSS Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	101 gene(s)	inside rSNPs	diseases
25	nsv884451	chr6:31783527-31800631	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	105 gene(s)	inside rSNPs	diseases
26	esv3349739	chr6:31785205-31796114	Weak transcription Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	87 gene(s)	inside rSNPs	diseases
27	nsv884453	chr6:31785228-31795370	Enhancers Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	77 gene(s)	inside rSNPs	diseases
28	esv2421830	chr6:31785228-31797422	Flanking Active TSS Weak transcription Active TSS Enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	90 gene(s)	inside rSNPs	diseases
29	nsv601947	chr6:31785228-31797422	Active TSS Weak transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	90 gene(s)	inside rSNPs	diseases
30	nsv884454	chr6:31785228-31797422	Active TSS Flanking Active TSS Enhancers Weak transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	90 gene(s)	inside rSNPs	diseases
31	nsv884455	chr6:31785228-31797422	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	90 gene(s)	inside rSNPs	diseases
32	nsv884456	chr6:31785228-31800631	Active TSS Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	97 gene(s)	inside rSNPs	diseases
33	nsv884457	chr6:31785228-31803130	Enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	114 gene(s)	inside rSNPs	diseases
34	nsv601950	chr6:31785438-32492308	Enhancers Bivalent Enhancer Active TSS Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	197 gene(s)	inside rSNPs	diseases
35	nsv601951	chr6:31785438-32496748	Enhancers Flanking Active TSS Strong transcription Weak transcription Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	197 gene(s)	inside rSNPs	diseases
36	nsv601954	chr6:31785453-31795345	Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	77 gene(s)	inside rSNPs	diseases
37	nsv884459	chr6:31785453-31795370	Flanking Active TSS Weak transcription Active TSS Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	77 gene(s)	inside rSNPs	diseases
38	nsv884460	chr6:31785453-31797422	Flanking Active TSS Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	90 gene(s)	inside rSNPs	diseases
39	nsv884461	chr6:31785453-31827045	Enhancers Flanking Active TSS Active TSS Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	117 gene(s)	inside rSNPs	diseases
40	nsv601955	chr6:31785453-32484368	Genic enhancers Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	196 gene(s)	inside rSNPs	diseases
41	nsv601956	chr6:31785453-32492308	Strong transcription Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	197 gene(s)	inside rSNPs	diseases
42	nsv884462	chr6:31785792-31797422	Enhancers Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	87 gene(s)	inside rSNPs	diseases
43	nsv462874	chr6:31794592-31864304	Enhancers Weak transcription Genic enhancers Active TSS Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	118 gene(s)	inside rSNPs	diseases
44	nsv601959	chr6:31794592-31864304	Strong transcription Enhancers Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	118 gene(s)	inside rSNPs	diseases
45	esv3329350	chr6:31794973-31799171	Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	81 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:31791200-31795400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr6:31794200-31795400	Flanking Active TSS	Adipose Nuclei	Adipose
3	chr6:31794200-31795400	Flanking Active TSS	Dnd41	blood
4	chr6:31794200-31795800	Active TSS	ES-I3 Cell Line	embryonic stem cell
5	chr6:31794200-31795800	Active TSS	H9 Cell Line	embryonic stem cell
6	chr6:31794200-31795800	Active TSS	Gastric	stomach
7	chr6:31794200-31795800	Active TSS	Right Ventricle	heart
8	chr6:31794200-31796000	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
9	chr6:31794200-31796000	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr6:31794400-31795600	Flanking Active TSS	Primary hematopoietic stem cells	blood
11	chr6:31794400-31795800	Active TSS	ES-WA7 Cell Line	embryonic stem cell
12	chr6:31794400-31795800	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
13	chr6:31794400-31795800	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
14	chr6:31794400-31795800	Flanking Active TSS	Primary B cells from cord blood	blood
15	chr6:31794400-31795800	Flanking Active TSS	Primary T cells fromperipheralblood	blood
16	chr6:31794400-31795800	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
17	chr6:31794400-31795800	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
18	chr6:31794400-31795800	Active TSS	Colon Smooth Muscle	Colon
19	chr6:31794400-31795800	Active TSS	Pancreatic Islets	Pancreatic Islet
20	chr6:31794400-31795800	Flanking Bivalent TSS/Enh	Fetal Thymus	thymus
21	chr6:31794400-31795800	Active TSS	Ovary	ovary
22	chr6:31794400-31795800	Active TSS	Sigmoid Colon	Sigmoid Colon
23	chr6:31794400-31796000	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
24	chr6:31794400-31796000	Active TSS	Brain Inferior Temporal Lobe	brain
25	chr6:31794400-31796000	Active TSS	Esophagus	oesophagus
26	chr6:31794600-31795400	Active TSS	Right Atrium	heart
27	chr6:31794600-31795800	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
28	chr6:31794600-31795800	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
29	chr6:31794600-31795800	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
30	chr6:31794600-31795800	Active TSS	Liver	Liver
31	chr6:31794600-31795800	Active TSS	Brain Substantia Nigra	brain
32	chr6:31794600-31795800	Active TSS	Duodenum Mucosa	Duodenum
33	chr6:31794600-31795800	Active TSS	Lung	lung
34	chr6:31794600-31795800	Active TSS	Psoas Muscle	Psoas
35	chr6:31794600-31795800	Active TSS	Small Intestine	intestine
36	chr6:31794600-31795800	Active TSS	A549	lung
37	chr6:31794600-31795800	Active TSS	NHDF-Ad	bronchial
38	chr6:31794600-31796000	Active TSS	H1 Cell Line	embryonic stem cell
39	chr6:31794600-31796000	Active TSS	HUES64 Cell Line	embryonic stem cell
40	chr6:31794600-31796000	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
41	chr6:31794600-31796000	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
42	chr6:31794600-31796000	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
43	chr6:31794600-31796000	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
44	chr6:31794600-31796000	Active TSS	Duodenum Smooth Muscle	Duodenum
45	chr6:31794600-31796000	Active TSS	Fetal Intestine Large	intestine
46	chr6:31794600-31796000	Active TSS	Left Ventricle	heart
47	chr6:31794600-31796000	Active TSS	Rectal Smooth Muscle	rectum
48	chr6:31794800-31795400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
49	chr6:31794800-31795400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
50	chr6:31794800-31795600	Active TSS	Colonic Mucosa	Colon

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