Variant report

Variant	esv3329350
Chromosome Location	chr6:31794973-31799171
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:948)
CpG islands
(count:1709)
Chromatin interactive
region (count:95)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:6)

(count:948 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:31797611-31798303	K562	blood:	n/a	n/a
2	ARID3A	chr6:31795225-31795631	HepG2	liver:	n/a	n/a
3	ARID3A	chr6:31798889-31799331	K562	blood:	n/a	n/a
4	ARID3A	chr6:31794588-31795662	K562	blood:	n/a	n/a
5	ATF1	chr6:31794660-31795686	K562	blood:	n/a	n/a
6	ATF2	chr6:31794649-31795145	GM12878	blood:	n/a	n/a
7	ATF2	chr6:31794358-31795746	GM12878	blood:	n/a	n/a
8	ATF3	chr6:31795382-31795812	A549	lung:	n/a	chr6:31795499-31795508
9	BACH1	chr6:31794329-31795014	K562	blood:	n/a	n/a
10	BACH1	chr6:31797607-31799758	K562	blood:	n/a	n/a
11	BACH1	chr6:31795394-31795737	K562	blood:	n/a	n/a
12	BCL3	chr6:31795244-31795804	A549	lung:	n/a	n/a
13	BCL3	chr6:31795316-31795719	A549	lung:	n/a	n/a
14	BCLAF1	chr6:31795403-31795709	GM12878	blood:	n/a	n/a
15	BCLAF1	chr6:31794567-31795101	GM12878	blood:	n/a	n/a
16	BHLHE40	chr6:31794492-31795740	K562	blood:	n/a	chr6:31795606-31795622
17	BHLHE40	chr6:31795091-31795714	HepG2	liver:	n/a	chr6:31795606-31795622
18	BHLHE40	chr6:31797859-31797875	HepG2	liver:	n/a	n/a
19	BHLHE40	chr6:31794646-31795591	GM12878	blood:	n/a	n/a
20	BHLHE40	chr6:31797739-31798242	GM12878	blood:	n/a	n/a
21	BRCA1	chr6:31794502-31795713	Hela-S3	cervix:	n/a	n/a
22	BRCA1	chr6:31795489-31795576	GM12878	blood:	n/a	n/a
23	BRCA1	chr6:31795389-31795699	HepG2	liver:	n/a	n/a
24	CBX3	chr6:31794192-31798316	K562	blood:	n/a	chr6:31794873-31794884
25	CBX3	chr6:31794747-31796481	K562	blood:	n/a	chr6:31794873-31794884
26	CCNT2	chr6:31798102-31799016	K562	blood:	n/a	chr6:31798307-31798316
27	CCNT2	chr6:31797488-31797860	K562	blood:	n/a	n/a
28	CCNT2	chr6:31794332-31795902	K562	blood:	n/a	n/a
29	CEBPB	chr6:31794191-31795295	GM12878	blood:	n/a	n/a
30	CEBPB	chr6:31794366-31795872	K562	blood:	n/a	chr6:31795445-31795453
31	CEBPB	chr6:31798293-31798609	MCF-7	breast:	n/a	chr6:31798456-31798467
32	CEBPB	chr6:31798369-31798569	H1-hESC	embryonic stem cell:	n/a	chr6:31798456-31798467
33	CEBPB	chr6:31798297-31798614	IMR90	lung:	n/a	chr6:31798456-31798467
34	CEBPB	chr6:31798346-31798623	A549	lung:	n/a	chr6:31798456-31798467
35	CEBPB	chr6:31798359-31798620	HepG2	liver:	n/a	chr6:31798456-31798467
36	CEBPB	chr6:31798202-31798927	K562	blood:	n/a	chr6:31798456-31798467
37	CEBPB	chr6:31794571-31795722	Hela-S3	cervix:	n/a	chr6:31795445-31795453
38	CEBPB	chr6:31794758-31795027	IMR90	lung:	n/a	n/a
39	CEBPB	chr6:31798338-31798522	HepG2	liver:	n/a	chr6:31798456-31798467
40	CEBPB	chr6:31795390-31795487	HepG2	liver:	n/a	chr6:31795445-31795453
41	CEBPB	chr6:31798304-31798524	K562	blood:	n/a	chr6:31798456-31798467
42	CEBPB	chr6:31798297-31798620	HepG2	liver:	n/a	chr6:31798456-31798467
43	CEBPB	chr6:31794645-31795722	K562	blood:	n/a	chr6:31795445-31795453
44	CEBPB	chr6:31798279-31798660	Hela-S3	cervix:	n/a	chr6:31798456-31798467
45	CEBPB	chr6:31798278-31799270	K562	blood:	n/a	chr6:31798456-31798467
46	CEBPD	chr6:31794932-31795732	HepG2	liver:	n/a	n/a
47	CEBPD	chr6:31795258-31795790	K562	blood:	n/a	n/a
48	CEBPD	chr6:31794612-31796279	K562	blood:	n/a	n/a
49	CEBPD	chr6:31795324-31795669	HepG2	liver:	n/a	n/a
50	CEBPZ	chr6:31795322-31795518	HepG2	liver:	n/a	n/a

(count:1709 , 50 per page) page: 1 2 3 4 5 6 7 ... 35

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:31797821-31797871	NHBE	bronchial:	n/a
2	chr6:31797821-31797871	NHBE	bronchial:	n/a
3	chr6:31795171-31795221	SAEC	small airway:	n/a
4	chr6:31795399-31795449	HMEC	breast:	n/a
5	chr6:31795065-31795115	PANC-1	pancreas:	n/a
6	chr6:31795144-31795194	HUVEC	blood vessel:	n/a
7	chr6:31795041-31795091	ECC-1	luminal epithelium:	n/a
8	chr6:31795241-31795291	A549	lung:	n/a
9	chr6:31795144-31795194	HIPEpiC	eye:	n/a
10	chr6:31795065-31795115	NHBE	bronchial:	n/a
11	chr6:31797421-31797471	SKMC	muscle:	n/a
12	chr6:31795573-31795623	PFSK-1	brain:	n/a
13	chr6:31798138-31798188	GM12891	blood:	n/a
14	chr6:31795195-31795245	HCPEpiC	choroid plexus:	n/a
15	chr6:31795678-31795728	Hela-S3	cervix:	n/a
16	chr6:31797954-31798004	AG10803	skin:	n/a
17	chr6:31795241-31795291	HCT-116	colon:	n/a
18	chr6:31795671-31795721	PrEC	prostate:	n/a
19	chr6:31795671-31795721	NHBE	bronchial:	n/a
20	chr6:31795125-31795175	PFSK-1	brain:	n/a
21	chr6:31795003-31795053	NT2-D1	testis:	n/a
22	chr6:31795573-31795623	HAEpiC	amniotic membrane:	n/a
23	chr6:31795573-31795623	SK-N-SH_RA	brain:	n/a
24	chr6:31798731-31798781	A549	lung:	n/a
25	chr6:31795436-31795486	GM12878	blood:	n/a
26	chr6:31795116-31795166	Jurkat	blood:	n/a
27	chr6:31795144-31795194	HPAEpiC	pulmonary alveolar:	n/a
28	chr6:31798731-31798781	HRCEpiC	kidney:	n/a
29	chr6:31798138-31798188	CMK	blood:	n/a
30	chr6:31795399-31795449	NT2-D1	testis:	n/a
31	chr6:31798138-31798188	NT2-D1	testis:	n/a
32	chr6:31795144-31795194	K562	blood:	n/a
33	chr6:31795116-31795166	HIPEpiC	eye:	n/a
34	chr6:31795635-31795685	IMR90	lung:	fetal
35	chr6:31798731-31798781	AG09309	skin:	n/a
36	chr6:31795008-31795058	Caco-2	colon:	n/a
37	chr6:31797416-31797466	SKMC	muscle:	n/a
38	chr6:31795241-31795291	Caco-2	colon:	n/a
39	chr6:31795144-31795194	HRE	kidney:	n/a
40	chr6:31795195-31795245	Jurkat	blood:	n/a
41	chr6:31798731-31798781	MCF10A-Er-Src	breast:	n/a
42	chr6:31795436-31795486	ProgFib	skin:	n/a
43	chr6:31795241-31795291	SK-N-SH	brain:	n/a
44	chr6:31795635-31795685	Hela-S3	cervix:	n/a
45	chr6:31795573-31795623	K562	blood:	n/a
46	chr6:31795392-31795442	HRPEpiC	eye:	n/a
47	chr6:31795181-31795231	GM12892	blood:	n/a
48	chr6:31798635-31798685	T-47D	breast:	n/a
49	chr6:31795125-31795175	NH-A	brain:	n/a
50	chr6:31795041-31795091	HCPEpiC	choroid plexus:	n/a

(count:95 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr6:31610323..31613172-chr6:31793267..31795561,2	MCF-7	breast:
2	chr6:31795638..31797726-chr6:32161977..32163708,2	K562	blood:
3	chr5:43018130..43019042-chr6:31795467..31796002,2	Hela-S3	cervix:
4	chr20:49347653..49348478-chr6:31794981..31795951,2	MCF-7	breast:
5	chr1:70820419..70821379-chr6:31794911..31795554,2	Hela-S3	cervix:
6	chr6:31695389..31697980-chr6:31796145..31797742,2	MCF-7	breast:
7	chr16:2014337..2015106-chr6:31795311..31795999,2	Hela-S3	cervix:
8	chr6:31799107..31802085-chr6:31837793..31840272,2	MCF-7	breast:
9	chr15:30113789..30114693-chr6:31795054..31795835,2	Hela-S3	cervix:
10	chr6:31795039..31796009-chr6:33175540..33176385,2	Hela-S3	cervix:
11	chr6:31793544..31795489-chr6:31833591..31835312,2	K562	blood:
12	chr6:31795326..31798240-chr6:31869248..31870828,2	K562	blood:
13	chr5:111496508..111497358-chr6:31795058..31795974,2	NB4	blood:
14	chr6:31619174..31622035-chr6:31794476..31797735,3	MCF-7	breast:
15	chr6:31756951..31764627-chr6:31780500..31799197,32	MCF-7	breast:
16	chr17:56708769..56709349-chr6:31795029..31795669,2	MCF-7	breast:
17	chr6:31740578..31741288-chr6:31797704..31798376,4	MCF-7	breast:
18	chr6:31686048..31689889-chr6:31795401..31797897,4	MCF-7	breast:
19	chr6:31758502..31767561-chr6:31786193..31804196,52	MCF-7	breast:
20	chr6:31794009..31796794-chr6:31937769..31941181,3	K562	blood:
21	chr6:31798147..31799673-chr6:31935211..31937564,2	K562	blood:
22	chr6:31793612..31800139-chr6:31830250..31833240,9	K562	blood:
23	chr6:31737226..31750413-chr6:31786206..31805473,50	MCF-7	breast:
24	chr14:24898313..24899033-chr6:31795142..31796000,2	Hela-S3	cervix:
25	chr6:31508088..31512302-chr6:31792582..31797881,5	K562	blood:
26	chr17:61850800..61851512-chr6:31794673..31795631,2	Hela-S3	cervix:
27	chr6:31795475..31798260-chr6:31864062..31867064,3	K562	blood:
28	chr1:116518929..116519531-chr6:31794722..31795650,2	Hela-S3	cervix:
29	chr19:50380060..50380616-chr6:31795080..31795682,2	Hela-S3	cervix:
30	chr16:89988437..89990274-chr6:31795215..31797917,2	MCF-7	breast:
31	chr6:31684129..31686897-chr6:31793349..31796953,3	MCF-7	breast:
32	chr6:31737477..31739729-chr6:31793263..31795025,2	MCF-7	breast:
33	chr6:31796727..31799560-chr6:31913553..31916544,2	MCF-7	breast:
34	chr6:31793241..31795291-chr6:31827897..31829868,2	K562	blood:
35	chr15:77223331..77224220-chr6:31795445..31796173,2	NB4	blood:
36	chr6:31795132..31795947-chr9:132245472..132246461,2	Hela-S3	cervix:
37	chr6:31782799..31783519-chr6:31795186..31795913,7	MCF-7	breast:
38	chr6:31797911..31799490-chr6:31827332..31829785,2	MCF-7	breast:
39	chr6:31782709..31783766-chr6:31794789..31796004,3	NB4	blood:
40	chr6:31698357..31701391-chr6:31793671..31797057,3	MCF-7	breast:
41	chr6:31508345..31511059-chr6:31794031..31797026,5	K562	blood:
42	chr16:87425636..87426576-chr6:31795079..31795938,2	Hela-S3	cervix:
43	chr6:31508352..31511076-chr6:31794765..31796870,2	MCF-7	breast:
44	chr6:31794734..31796775-chr6:31868219..31871084,2	MCF-7	breast:
45	chr6:31795413..31795934-chr9:117373017..117374000,2	Hela-S3	cervix:
46	chr10:38146501..38147130-chr6:31795044..31795963,2	Hela-S3	cervix:
47	chr6:31648223..31648743-chr6:31797705..31798338,2	K562	blood:
48	chr6:31795117..31796771-chr6:31916814..31918698,2	K562	blood:
49	chr6:31797405..31799206-chr6:31828382..31830105,2	K562	blood:
50	chr6:31794807..31796884-chr6:31844966..31847954,2	MCF-7	breast:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-HSPA1B-1	chr6:31794980-31795104	XLOC_005252

No data

(count:6 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	HSPA1B	hsa-miR-16-5p	chr6:31797698-31797719
2	HSPA1B	hsa-miR-15a-5p	chr6:31797698-31797719
3	HSPA1B	hsa-miR-16-5p	chr6:31797736-31797757
4	HSPA1B	hsa-miR-15a-5p	chr6:31797736-31797757
5	HSPA1B	hsa-miR-30d-5p	chr6:31797981-31798002
6	HSPA1B	hsa-miR-34a-5p	chr6:31797882-31797902

Variant related genes	Relation type
C6orf48	TF binding region
SNORD48	TF binding region
HSPA1B	TF binding region
C6orf48	CpG island
SNORD48	CpG island
HSPA1B	CpG island
ENSG00000104064	chromatin interactions
ENSG00000204386	chromatin interactions
ENSG00000123130	chromatin interactions
ENSG00000258947	chromatin interactions
ENSG00000204385	chromatin interactions
ENSG00000224032	chromatin interactions
ENSG00000204469	chromatin interactions
ENSG00000170345	chromatin interactions
ENSG00000104067	chromatin interactions
ENSG00000263756	chromatin interactions
ENSG00000183283	chromatin interactions
ENSG00000213676	chromatin interactions
ENSG00000160953	chromatin interactions
ENSG00000163393	chromatin interactions
ENSG00000212195	chromatin interactions
ENSG00000103264	chromatin interactions
ENSG00000122642	chromatin interactions
ENSG00000204256	chromatin interactions
ENSG00000124171	chromatin interactions
ENSG00000204315	chromatin interactions
ENSG00000204673	chromatin interactions
ENSG00000204366	chromatin interactions
ENSG00000244879	chromatin interactions
ENSG00000204351	chromatin interactions
ENSG00000204054	chromatin interactions
ENSG00000204344	chromatin interactions
ENSG00000213722	chromatin interactions
ENSG00000166278	chromatin interactions
ENSG00000204396	chromatin interactions
ENSG00000117906	chromatin interactions
ENSG00000204435	chromatin interactions
ENSG00000204390	chromatin interactions
ENSG00000263020	chromatin interactions
ENSG00000204301	chromatin interactions
ENSG00000259006	chromatin interactions
ENSG00000204438	chromatin interactions
ENSG00000251131	chromatin interactions
ENSG00000198105	chromatin interactions
ENSG00000204444	chromatin interactions
ENSG00000139899	chromatin interactions
ENSG00000250365	chromatin interactions
ENSG00000204421	chromatin interactions
ENSG00000204394	chromatin interactions
ENSG00000204410	chromatin interactions
ENSG00000106052	chromatin interactions
ENSG00000204420	chromatin interactions
ENSG00000198231	chromatin interactions
ENSG00000145901	chromatin interactions
ENSG00000236514	chromatin interactions
ENSG00000197568	chromatin interactions
ENSG00000255152	chromatin interactions
ENSG00000213654	chromatin interactions
ENSG00000140988	chromatin interactions
ENSG00000243649	chromatin interactions
ENSG00000204428	chromatin interactions
ENSG00000100441	chromatin interactions
ENSG00000238363	chromatin interactions
ENSG00000198563	chromatin interactions
ENSG00000140941	chromatin interactions
ENSG00000199036	chromatin interactions
ENSG00000108588	chromatin interactions
ENSG00000129493	chromatin interactions
ENSG00000204257	chromatin interactions
ENSG00000157693	chromatin interactions
ENSG00000234006	chromatin interactions
ENSG00000204389	chromatin interactions
ENSG00000204463	chromatin interactions
ENSG00000204227	chromatin interactions
ENSG00000255198	chromatin interactions
ENSG00000223837	chromatin interactions
ENSG00000177738	chromatin interactions
ENSG00000120129	chromatin interactions
ENSG00000201555	chromatin interactions
ENSG00000213719	chromatin interactions
ENSG00000265236	chromatin interactions
ENSG00000204371	chromatin interactions
ENSG00000148730	chromatin interactions
ENSG00000204348	chromatin interactions

Extended variants
information (count: 134 )
Associated
traits (count: 131 )

Variant overlapped rSNPs/rCNVs (count:134 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs554925829	chr6:31794997-31794998	Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	39 gene(s)	Overlapped CNVs	n/a
2	rs111862534	chr6:31795004-31795005	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	Overlapped CNVs	n/a
3	rs555993297	chr6:31795016-31795017	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	Overlapped CNVs	n/a
4	rs573265664	chr6:31795030-31795031	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	Overlapped CNVs	n/a
5	rs556168456	chr6:31795049-31795050	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	Overlapped CNVs	n/a
6	rs566144133	chr6:31795056-31795057	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	Overlapped CNVs	n/a
7	rs62395830	chr6:31795059-31795060	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	47 gene(s)	Overlapped CNVs	n/a
8	rs556001598	chr6:31795062-31795063	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	47 gene(s)	Overlapped CNVs	n/a
9	rs375097319	chr6:31795248-31795249	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	56 gene(s)	Overlapped CNVs	n/a
10	rs138194252	chr6:31795266-31795267	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	59 gene(s)	Overlapped CNVs	n/a
11	rs376368028	chr6:31795269-31795270	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	59 gene(s)	Overlapped CNVs	n/a
12	rs11576017	chr6:31795275-31795276	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	59 gene(s)	Overlapped CNVs	n/a
13	rs11576016	chr6:31795299-31795300	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	59 gene(s)	Overlapped CNVs	n/a
14	rs543036200	chr6:31795322-31795323	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	61 gene(s)	Overlapped CNVs	n/a
15	rs11576015	chr6:31795345-31795346	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	61 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs545744028	chr6:31795352-31795353	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	61 gene(s)	Overlapped CNVs	n/a
17	rs555939957	chr6:31795380-31795381	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	62 gene(s)	Overlapped CNVs	n/a
18	rs17201199	chr6:31795384-31795385	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	62 gene(s)	Overlapped CNVs	n/a
19	rs181732231	chr6:31795436-31795437	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	66 gene(s)	Overlapped CNVs	n/a
20	rs565430409	chr6:31795442-31795443	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	66 gene(s)	Overlapped CNVs	n/a
21	rs184693879	chr6:31795453-31795454	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	67 gene(s)	Overlapped CNVs	n/a
22	rs547650914	chr6:31795462-31795463	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	68 gene(s)	Overlapped CNVs	n/a
23	rs566295595	chr6:31795481-31795482	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	70 gene(s)	Overlapped CNVs	n/a
24	rs139873915	chr6:31795500-31795501	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	70 gene(s)	Overlapped CNVs	n/a
25	rs113775903	chr6:31795506-31795507	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	70 gene(s)	Overlapped CNVs	n/a
26	rs548638667	chr6:31795521-31795522	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	70 gene(s)	Overlapped CNVs	n/a
27	rs567032880	chr6:31795524-31795525	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	70 gene(s)	Overlapped CNVs	n/a
28	rs544819831	chr6:31795525-31795526	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	70 gene(s)	Overlapped CNVs	n/a
29	rs11576014	chr6:31795536-31795537	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	70 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs368738599	chr6:31795540-31795541	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	70 gene(s)	Overlapped CNVs	n/a
31	rs553797882	chr6:31795542-31795543	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	70 gene(s)	Overlapped CNVs	n/a
32	rs572178551	chr6:31795547-31795548	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	70 gene(s)	Overlapped CNVs	n/a
33	rs36058616	chr6:31795548-31795549	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	70 gene(s)	Overlapped CNVs	n/a
34	rs11576013	chr6:31795561-31795562	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	69 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs543835198	chr6:31795563-31795564	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	69 gene(s)	Overlapped CNVs	n/a
36	rs565305638	chr6:31795581-31795582	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	69 gene(s)	Overlapped CNVs	n/a
37	rs532676974	chr6:31795601-31795602	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	69 gene(s)	Overlapped CNVs	n/a
38	rs541674586	chr6:31795618-31795619	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	69 gene(s)	Overlapped CNVs	n/a
39	rs368877313	chr6:31795639-31795640	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	68 gene(s)	Overlapped CNVs	n/a
40	rs369266199	chr6:31795706-31795707	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	65 gene(s)	Overlapped CNVs	n/a
41	rs552875580	chr6:31795708-31795709	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	65 gene(s)	Overlapped CNVs	n/a
42	rs369387484	chr6:31795709-31795710	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	65 gene(s)	Overlapped CNVs	n/a
43	rs202014917	chr6:31795716-31795717	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	65 gene(s)	Overlapped CNVs	n/a
44	rs199901440	chr6:31795721-31795722	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	65 gene(s)	Overlapped CNVs	n/a
45	rs199562339	chr6:31795732-31795733	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	Chromatin interactive region	64 gene(s)	Overlapped CNVs	n/a
46	rs368848050	chr6:31795733-31795734	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	Chromatin interactive region	64 gene(s)	Overlapped CNVs	n/a
47	rs373056566	chr6:31795741-31795742	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	Chromatin interactive region	64 gene(s)	Overlapped CNVs	n/a
48	rs375533667	chr6:31795799-31795800	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	Chromatin interactive region	62 gene(s)	Overlapped CNVs	n/a
49	rs371573539	chr6:31795832-31795833	Weak transcription Active TSS	Chromatin interactive region	62 gene(s)	Overlapped CNVs	n/a
50	rs201228591	chr6:31795833-31795834	Weak transcription Active TSS	Chromatin interactive region	62 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:131)

Disease	PMID	Source
Follicular lymphoma	20505157	CNVD
Glioblastoma multiforme	21080181	CNVD
Ewing''s sarcoma	21437220	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
Lung cancer	18438408	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Melanoma	18172304	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Breast cancer	21552322	CNVD
Immune disease	21076436	CNVD
Autoimmune disease	19135723	CNVD
Systemic lupus erythematosus	17953491	CNVD
Recurrent Infections	22737222	CNVD
Systemic lupus erythematosus	21904924	CNVD
Ovarian cancer	21781307	CNVD
Ependymoma	19289631	CNVD
Breast cancer	22844521	CNVD
Gestational infection	22844521	CNVD
HIV/AIDS	22844521	CNVD
Head circumference	22844521	CNVD
Infertility	22844521	CNVD
Ovarian cancer	22844521	CNVD
Prostate cancer	22844521	CNVD
Psoriasis	22844521	CNVD
Recurrent birth weight diabetes	22844521	CNVD
Rheumatoid arthritis	22844521	CNVD
Sclerosis systemic	22844521	CNVD
Systemic lupus erythematosus	22844521	CNVD
Obesity	22844521	CNVD
Recurrent pregnancy loss	22844521	CNVD
Intellectual disability	21811512	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Congenital anomalies of the kidney and urinary tract	18694510	CNVD
Nasopharyngeal cancer	22815911	CNVD
Hepatocellular carcinoma	16750200	CNVD
Basal cell lymphoma	21115979	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Autism	22495311	CNVD
Cancer	16790693	CNVD
Cervical cancer	21062161	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Systemic lupus erythematosus	17503323	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Urothelial carcinoma	18382360	CNVD
Cancer	21183584	CNVD
Hodgkin''s lymphoma	17606441	CNVD
small cell lung cancer	20016488	CNVD
Renal cell carcinoma	18765545	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Gastric cancer	17908304	CNVD
Metanephric adenoma	20802469	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Schizophrenia	19571808	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Neuroblastoma	16790693	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
abnormal development	18461090	CNVD
Melanoma	17363583	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	16397240	CNVD
Retinoblastoma	22278416	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Systemic lupus erythematosus	20877625	CNVD
Cleidocranial dysplasia	18696259	CNVD
Holoprosencephaly	21359414	CNVD
Liposarcoma	21253554	CNVD
Uveal melanoma	20484589	CNVD
Fibroblasts	20926602	CNVD
Breast cancer	21364760	CNVD
Systemic lupus erythematosus	19279649	CNVD
Retinoblastoma	16790693	CNVD
Acute myocardial infarction	18032375	CNVD
Renal cell carcinoma	19150565	CNVD
Systemic lupus erythematosus	19591781	CNVD
Attention deficit hyperactivity disorder	19287146	CNVD
Autism	19287146	CNVD
Erythema nodosum in leprosy	19287146	CNVD
Henoch-schoenlein purpura	19287146	CNVD
Liver cirrhosis	19287146	CNVD
Systemic lupus erythematosus	19287146	CNVD
Congenital adrenal hyperplasia	18478071	CNVD
Systemic lupus erythematosus	19287147	CNVD
Osteosarcoma	16790693	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
Cancer	22183965	CNVD
Melanoma	22183965	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:630 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:31791200-31795400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr6:31794200-31795000	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
3	chr6:31794200-31795000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr6:31794200-31795000	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr6:31794200-31795000	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr6:31794200-31795000	Flanking Active TSS	Fetal Kidney	kidney
7	chr6:31794200-31795000	Flanking Active TSS	Fetal Muscle Trunk	muscle
8	chr6:31794200-31795000	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
9	chr6:31794200-31795000	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
10	chr6:31794200-31795000	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
11	chr6:31794200-31795400	Flanking Active TSS	Adipose Nuclei	Adipose
12	chr6:31794200-31795400	Flanking Active TSS	Dnd41	blood
13	chr6:31794200-31795800	Active TSS	ES-I3 Cell Line	embryonic stem cell
14	chr6:31794200-31795800	Active TSS	H9 Cell Line	embryonic stem cell
15	chr6:31794200-31795800	Active TSS	Gastric	stomach
16	chr6:31794200-31795800	Active TSS	Right Ventricle	heart
17	chr6:31794200-31796000	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
18	chr6:31794200-31796000	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
19	chr6:31794400-31795000	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
20	chr6:31794400-31795000	Flanking Active TSS	Primary B cells from peripheral blood	blood
21	chr6:31794400-31795000	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
22	chr6:31794400-31795000	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood
23	chr6:31794400-31795000	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
24	chr6:31794400-31795000	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
25	chr6:31794400-31795000	Flanking Active TSS	Primary Natural Killer cells fromperipheralblood	blood
26	chr6:31794400-31795000	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
27	chr6:31794400-31795000	Active TSS	Aorta	Aorta
28	chr6:31794400-31795000	Flanking Active TSS	Brain Germinal Matrix	brain
29	chr6:31794400-31795000	Flanking Active TSS	Fetal Adrenal Gland	Adrenal Gland
30	chr6:31794400-31795000	Flanking Active TSS	Fetal Brain Male	brain
31	chr6:31794400-31795000	Flanking Active TSS	Placenta	Placenta
32	chr6:31794400-31795000	Flanking Active TSS	HepG2	liver
33	chr6:31794400-31795000	Flanking Active TSS	HUVEC	blood vessel
34	chr6:31794400-31795200	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
35	chr6:31794400-31795200	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
36	chr6:31794400-31795200	Flanking Active TSS	Fetal Brain Female	brain
37	chr6:31794400-31795600	Flanking Active TSS	Primary hematopoietic stem cells	blood
38	chr6:31794400-31795800	Active TSS	ES-WA7 Cell Line	embryonic stem cell
39	chr6:31794400-31795800	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
40	chr6:31794400-31795800	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
41	chr6:31794400-31795800	Flanking Active TSS	Primary B cells from cord blood	blood
42	chr6:31794400-31795800	Flanking Active TSS	Primary T cells fromperipheralblood	blood
43	chr6:31794400-31795800	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
44	chr6:31794400-31795800	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
45	chr6:31794400-31795800	Active TSS	Colon Smooth Muscle	Colon
46	chr6:31794400-31795800	Active TSS	Pancreatic Islets	Pancreatic Islet
47	chr6:31794400-31795800	Flanking Bivalent TSS/Enh	Fetal Thymus	thymus
48	chr6:31794400-31795800	Active TSS	Ovary	ovary
49	chr6:31794400-31795800	Active TSS	Sigmoid Colon	Sigmoid Colon
50	chr6:31794400-31796000	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell

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