Variant report

Variant	rs543189807
Chromosome Location	chr7:15642938-15642939
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv932168	chr7:15573437-15895294	Flanking Active TSS Enhancers Bivalent Enhancer Active TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
2	nsv523199	chr7:15582208-16042596	Enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	11 gene(s)	inside rSNPs	diseases
3	nsv887735	chr7:15625992-15698178	Enhancers Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA miRNA target site	n/a	inside rSNPs	diseases
4	nsv464392	chr7:15642053-15654614	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription	Chromatin interactive region miRNA target site	n/a	inside rSNPs	diseases
5	nsv606310	chr7:15642053-15654614	Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription	Chromatin interactive region miRNA target site	n/a	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:15630200-15648800	Weak transcription	Fetal Lung	lung
2	chr7:15640000-15651200	Weak transcription	Adipose Nuclei	Adipose
3	chr7:15640000-15662400	Weak transcription	Fetal Muscle Leg	muscle
4	chr7:15640000-15663800	Weak transcription	Fetal Muscle Trunk	muscle
5	chr7:15641800-15643000	Enhancers	Fetal Heart	heart
6	chr7:15642000-15643400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr7:15642000-15643400	Enhancers	NHDF-Ad	bronchial
8	chr7:15642600-15643200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr7:15642600-15643400	Enhancers	Osteobl	bone

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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