The 2.0 version of rSNPBase

Variant report

Variant rs543417848
Chromosome Location chr9:26879068-26879069
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:26822200-26889400 Weak transcription Psoas Muscle Psoas
2 chr9:26834000-26882400 Weak transcription HUVEC blood vessel
3 chr9:26834200-26880200 Weak transcription Lung lung
4 chr9:26834200-26880200 Weak transcription NHEK skin
5 chr9:26834200-26882200 Weak transcription HMEC breast
6 chr9:26834200-26888200 Weak transcription Muscle Satellite Cultured Cells --
7 chr9:26834200-26891200 Weak transcription NHDF-Ad bronchial
8 chr9:26836400-26879600 Weak transcription Esophagus oesophagus
9 chr9:26836600-26891400 Weak transcription Brain Substantia Nigra brain
10 chr9:26838200-26879600 Weak transcription Pancreas Pancrea
11 chr9:26840600-26882400 Weak transcription Brain Cingulate Gyrus brain
12 chr9:26840800-26879800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr9:26841200-26879800 Weak transcription Colonic Mucosa Colon
14 chr9:26842600-26882200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr9:26842800-26879600 Weak transcription Thymus Thymus
16 chr9:26846600-26881600 Weak transcription Primary neutrophils fromperipheralblood blood
17 chr9:26847000-26883000 Weak transcription K562 blood
18 chr9:26851400-26888000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
19 chr9:26851800-26888600 Weak transcription Fetal Heart heart
20 chr9:26851800-26891600 Weak transcription Stomach Mucosa stomach
21 chr9:26852400-26888000 Weak transcription NHLF lung
22 chr9:26855000-26882200 Weak transcription Right Ventricle heart
23 chr9:26855400-26880200 Weak transcription HepG2 liver
24 chr9:26855800-26888200 Weak transcription NH-A brain
25 chr9:26856000-26881600 Weak transcription Brain Hippocampus Middle brain
26 chr9:26856000-26882200 Weak transcription Brain Anterior Caudate brain
27 chr9:26856000-26882200 Weak transcription Brain Inferior Temporal Lobe brain
28 chr9:26856200-26881400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
29 chr9:26856600-26888400 Weak transcription Osteobl bone
30 chr9:26857600-26891000 Weak transcription ES-WA7 Cell Line embryonic stem cell
31 chr9:26859400-26882200 Weak transcription Small Intestine intestine
32 chr9:26859600-26879200 Weak transcription Stomach Smooth Muscle stomach
33 chr9:26859600-26881400 Weak transcription HSMMtube muscle
34 chr9:26859800-26880400 Weak transcription iPS-15b Cell Line embryonic stem cell
35 chr9:26859800-26890000 Weak transcription Colon Smooth Muscle Colon
36 chr9:26860200-26879600 Weak transcription iPS-18 Cell Line embryonic stem cell
37 chr9:26861400-26880200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr9:26867000-26880200 Weak transcription Gastric stomach
39 chr9:26868400-26880200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr9:26868600-26879600 Weak transcription Fetal Adrenal Gland Adrenal Gland
41 chr9:26871000-26879600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr9:26871000-26879800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr9:26871200-26879600 Weak transcription Fetal Thymus thymus
44 chr9:26871200-26882200 Weak transcription Hela-S3 cervix
45 chr9:26872400-26880800 Weak transcription Primary T helper naive cells from peripheral blood blood
46 chr9:26872800-26879600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
47 chr9:26873400-26881400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr9:26875600-26882200 Strong transcription HUES64 Cell Line embryonic stem cell
49 chr9:26875600-26882200 Strong transcription Liver Liver
50 chr9:26875600-26882200 Strong transcription Fetal Muscle Trunk muscle

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Last update: Aug 31, 2015