Variant report

Variant	rs543768807
Chromosome Location	chr10:18487411-18487412
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1039174	chr10:18474463-18493676	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Bivalent Enhancer	n/a	n/a	inside rSNPs	diseases
2	esv3321902	chr10:18486496-18487844	Enhancers Weak transcription Active TSS Flanking Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18469400-18491200	Weak transcription	Primary hematopoietic stem cells	blood
2	chr10:18475200-18491600	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr10:18481800-18490200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr10:18483600-18487800	Enhancers	Rectal Smooth Muscle	rectum
5	chr10:18484800-18487600	Enhancers	Stomach Smooth Muscle	stomach
6	chr10:18485000-18503800	Weak transcription	Duodenum Smooth Muscle	Duodenum
7	chr10:18486600-18491000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
8	chr10:18486600-18491000	Weak transcription	Fetal Heart	heart
9	chr10:18486600-18491200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr10:18486600-18491600	Weak transcription	Aorta	Aorta
11	chr10:18486600-18491800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
12	chr10:18486600-18492200	Weak transcription	Fetal Intestine Large	intestine
13	chr10:18486800-18491200	Weak transcription	Cortex derived primary cultured neurospheres	brain
14	chr10:18486800-18491200	Weak transcription	Colon Smooth Muscle	Colon
15	chr10:18486800-18492000	Weak transcription	Left Ventricle	heart
16	chr10:18486800-18502000	Weak transcription	Fetal Stomach	stomach
17	chr10:18487200-18487800	Enhancers	Right Ventricle	heart
18	chr10:18487400-18487800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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