The 2.0 version of rSNPBase

Variant report

Variant rs544856036
Chromosome Location chr10:93365529-93365530
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:93357600-93368000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
2 chr10:93357800-93367600 Weak transcription Brain Hippocampus Middle brain
3 chr10:93358400-93366400 Enhancers Hela-S3 cervix
4 chr10:93358400-93367600 Weak transcription Brain Anterior Caudate brain
5 chr10:93361000-93367400 Weak transcription Psoas Muscle Psoas
6 chr10:93361200-93366400 Enhancers Fetal Heart heart
7 chr10:93361800-93365600 Enhancers HSMM muscle
8 chr10:93362400-93365600 Enhancers Fetal Adrenal Gland Adrenal Gland
9 chr10:93362400-93365600 Enhancers Fetal Stomach stomach
10 chr10:93362800-93367600 Weak transcription Right Ventricle heart
11 chr10:93363200-93365600 Enhancers NHLF lung
12 chr10:93363200-93365800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr10:93363400-93365600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr10:93363400-93365600 Enhancers Osteobl bone
15 chr10:93363600-93365600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
16 chr10:93363800-93367400 Weak transcription Pancreas Pancrea
17 chr10:93363800-93367600 Weak transcription Brain Cingulate Gyrus brain
18 chr10:93364000-93367400 Weak transcription Aorta Aorta
19 chr10:93364000-93367400 Weak transcription Right Atrium heart
20 chr10:93364000-93367800 Weak transcription Stomach Mucosa stomach
21 chr10:93364200-93367400 Weak transcription Skeletal Muscle Male skeletal muscle
22 chr10:93364400-93367400 Weak transcription Ovary ovary
23 chr10:93364600-93366200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr10:93364600-93368400 Weak transcription Gastric stomach
25 chr10:93364800-93365600 Enhancers NH-A brain
26 chr10:93364800-93365800 Enhancers NHDF-Ad bronchial
27 chr10:93364800-93367400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr10:93364800-93367400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr10:93364800-93367400 Weak transcription Skeletal Muscle Female skeletal muscle
30 chr10:93365000-93365600 Enhancers HUVEC blood vessel
31 chr10:93365200-93365600 ZNF genes & repeats A549 lung
32 chr10:93365200-93367600 Weak transcription Placenta Amnion Placenta Amnion
33 chr10:93365400-93365600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr10:93365400-93365600 Flanking Active TSS Muscle Satellite Cultured Cells --
35 chr10:93365400-93365600 Weak transcription HSMMtube muscle
36 chr10:93365400-93367200 Weak transcription Colon Smooth Muscle Colon
37 chr10:93365400-93367200 Weak transcription Rectal Smooth Muscle rectum
38 chr10:93365400-93367400 Weak transcription Breast Myoepithelial Primary Cells Breast
39 chr10:93365400-93367400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr10:93365400-93367400 Weak transcription Fetal Kidney kidney
41 chr10:93365400-93367400 Weak transcription Fetal Lung lung
42 chr10:93365400-93367800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015