Variant report

Variant rs544889522
Chromosome Location chr19:39938194-39938195
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:39936800-39938600 Enhancers Spleen Spleen
2 chr19:39936800-39949200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr19:39937000-39938200 Enhancers Placenta Amnion Placenta Amnion
4 chr19:39937000-39938800 Weak transcription Aorta Aorta
5 chr19:39937000-39939000 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
6 chr19:39937000-39949000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr19:39937000-39971000 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr19:39937200-39938400 Enhancers Primary Natural Killer cells fromperipheralblood blood
9 chr19:39937200-39938400 Enhancers Monocytes-CD14+_RO01746 blood
10 chr19:39937200-39938600 Enhancers Primary monocytes fromperipheralblood blood
11 chr19:39937200-39938600 Enhancers Thymus Thymus
12 chr19:39937200-39938800 Enhancers Primary hematopoietic stem cells blood
13 chr19:39937200-39938800 Genic enhancers Fetal Muscle Trunk muscle
14 chr19:39937200-39938800 Weak transcription Ovary ovary
15 chr19:39937200-39939200 Genic enhancers Fetal Adrenal Gland Adrenal Gland
16 chr19:39937200-39939200 Genic enhancers Fetal Lung lung
17 chr19:39937200-39939200 Enhancers Stomach Mucosa stomach
18 chr19:39937200-39939400 Genic enhancers Fetal Stomach stomach
19 chr19:39937200-39940600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr19:39937200-39941600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
21 chr19:39937200-39943800 Weak transcription ES-I3 Cell Line embryonic stem cell
22 chr19:39937400-39938200 Enhancers Primary neutrophils fromperipheralblood blood
23 chr19:39937400-39938200 Enhancers Primary mononuclear cells fromperipheralblood Blood
24 chr19:39937400-39938200 Enhancers Brain Inferior Temporal Lobe brain
25 chr19:39937400-39938400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr19:39937400-39938400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
27 chr19:39937400-39938400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr19:39937400-39938400 Enhancers Adipose Nuclei Adipose
29 chr19:39937400-39938400 Weak transcription Fetal Brain Female brain
30 chr19:39937400-39938400 Enhancers Fetal Thymus thymus
31 chr19:39937400-39938600 Weak transcription H1 Cell Line embryonic stem cell
32 chr19:39937400-39938600 Enhancers Primary B cells from peripheral blood blood
33 chr19:39937400-39938800 Weak transcription H9 Cell Line embryonic stem cell
34 chr19:39937400-39938800 Enhancers Primary B cells from cord blood blood
35 chr19:39937400-39938800 Genic enhancers Cortex derived primary cultured neurospheres brain
36 chr19:39937400-39938800 Genic enhancers Osteobl bone
37 chr19:39937400-39939200 Enhancers Skeletal Muscle Male skeletal muscle
38 chr19:39937400-39939400 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
39 chr19:39937400-39939400 Genic enhancers Fetal Muscle Leg muscle
40 chr19:39937400-39939400 Enhancers NHDF-Ad bronchial
41 chr19:39937400-39940000 Genic enhancers Brain Cingulate Gyrus brain
42 chr19:39937400-39940200 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr19:39937400-39941200 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr19:39937400-39942800 Weak transcription Fetal Kidney kidney
45 chr19:39937400-39944600 Weak transcription iPS-15b Cell Line embryonic stem cell
46 chr19:39937400-39971000 Weak transcription Right Atrium heart
47 chr19:39937600-39938200 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr19:39937600-39938200 Weak transcription Pancreatic Islets Pancreatic Islet
49 chr19:39937600-39938400 Weak transcription Brain Anterior Caudate brain
50 chr19:39937600-39938600 Genic enhancers H9 Derived Neuron Cultured Cells ES cell derived

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