Variant report

Variant	rs545185815
Chromosome Location	chr6:91799181-91799182
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2752130	chr6:91740447-92196479	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv830726	chr6:91750692-91921838	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv1031681	chr6:91784557-92075312	Flanking Bivalent TSS/Enh Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv538359	chr6:91784557-92075312	Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	esv3472967	chr6:91798520-91800795	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv3472965	chr6:91798689-91800690	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv3472966	chr6:91798730-91800673	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv3472964	chr6:91798759-91800627	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
9	esv3472968	chr6:91798759-91800627	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:91797400-91799200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr6:91797600-91799200	Enhancers	Skeletal Muscle Female	skeletal muscle
3	chr6:91797600-91806600	Weak transcription	Fetal Stomach	stomach
4	chr6:91798200-91799200	Enhancers	Ovary	ovary
5	chr6:91798400-91799200	Enhancers	Fetal Heart	heart
6	chr6:91798400-91807200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr6:91798600-91806400	Weak transcription	Cortex derived primary cultured neurospheres	brain
8	chr6:91799000-91799200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links