Variant report

Variant	rs546491813
Chromosome Location	chr11:86306781-86306782
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:86299094..86301752-chr11:86305764..86307312,2	K562	blood:

Extended variants
information (count: 12 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:12 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1044081	chr11:86133641-86868560	Bivalent/Poised TSS Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
2	nsv541118	chr11:86133641-86868560	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
3	nsv555665	chr11:86230898-86417553	Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
4	nsv1055071	chr11:86301240-86465465	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
5	esv3463753	chr11:86302304-86308102	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
6	nsv8852	chr11:86303499-86306788	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv3463764	chr11:86303900-86306838	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
8	nsv826022	chr11:86304193-86306853	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
9	nsv819492	chr11:86304212-86307059	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
10	nsv555694	chr11:86304732-86307016	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
11	nsv555703	chr11:86305676-86307016	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
12	nsv898057	chr11:86306401-86335459	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:68 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:86297400-86308000	Weak transcription	Fetal Muscle Trunk	muscle
2	chr11:86298000-86307000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr11:86298200-86307400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr11:86300200-86308200	Weak transcription	Fetal Brain Male	brain
5	chr11:86300200-86318800	Weak transcription	Esophagus	oesophagus
6	chr11:86300800-86308800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
7	chr11:86301600-86307000	Enhancers	ES-I3 Cell Line	embryonic stem cell
8	chr11:86302200-86309000	Enhancers	HUVEC	blood vessel
9	chr11:86302400-86306800	Enhancers	HMEC	breast
10	chr11:86302600-86307000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr11:86303000-86306800	Enhancers	NHDF-Ad	bronchial
12	chr11:86303000-86307000	Enhancers	NHEK	skin
13	chr11:86303200-86306800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr11:86303600-86307200	Enhancers	Pancreatic Islets	Pancreatic Islet
15	chr11:86304200-86308000	Weak transcription	Aorta	Aorta
16	chr11:86304200-86308000	Weak transcription	Placenta Amnion	Placenta Amnion
17	chr11:86304200-86308200	Weak transcription	Fetal Stomach	stomach
18	chr11:86304400-86306800	Enhancers	Muscle Satellite Cultured Cells	--
19	chr11:86304400-86307800	Weak transcription	Adipose Nuclei	Adipose
20	chr11:86304400-86307800	Weak transcription	Ovary	ovary
21	chr11:86304400-86308000	Weak transcription	Brain Cingulate Gyrus	brain
22	chr11:86304400-86308000	Weak transcription	Right Ventricle	heart
23	chr11:86304400-86308200	Weak transcription	Fetal Lung	lung
24	chr11:86304400-86308400	Weak transcription	Brain Anterior Caudate	brain
25	chr11:86304400-86309000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
26	chr11:86304600-86307600	Weak transcription	Skeletal Muscle Female	skeletal muscle
27	chr11:86304600-86307800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
28	chr11:86304600-86307800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
29	chr11:86304600-86308000	Weak transcription	Primary monocytes fromperipheralblood	blood
30	chr11:86304600-86308000	Weak transcription	Fetal Heart	heart
31	chr11:86304600-86308000	Weak transcription	Rectal Smooth Muscle	rectum
32	chr11:86304600-86308000	Weak transcription	Skeletal Muscle Male	skeletal muscle
33	chr11:86304600-86308200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
34	chr11:86304600-86308200	Weak transcription	Colon Smooth Muscle	Colon
35	chr11:86304600-86308200	Weak transcription	Duodenum Smooth Muscle	Duodenum
36	chr11:86304800-86306800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
37	chr11:86304800-86308000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
38	chr11:86305000-86306800	Enhancers	iPS-15b Cell Line	embryonic stem cell
39	chr11:86305200-86306800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
40	chr11:86305200-86307000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
41	chr11:86305400-86306800	Enhancers	H1 Cell Line	embryonic stem cell
42	chr11:86305400-86306800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
43	chr11:86305400-86307000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
44	chr11:86305400-86307000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
45	chr11:86305400-86307000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
46	chr11:86305400-86307000	Enhancers	Left Ventricle	heart
47	chr11:86305600-86307000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
48	chr11:86305600-86307000	Enhancers	NH-A	brain
49	chr11:86306000-86306800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
50	chr11:86306400-86307000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin

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