Variant report

Variant	rs546687019
Chromosome Location	chr6:66321194-66321195
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:14 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv886012	chr6:65905998-66354809	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases
2	nsv886029	chr6:66133281-66333105	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	esv2763559	chr6:66201093-66360660	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv603442	chr6:66221979-66321544	ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv470825	chr6:66269399-66326945	Enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
6	nsv886032	chr6:66278575-66622346	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
7	nsv603443	chr6:66304163-66326945	Enhancers Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
8	nsv603444	chr6:66304163-66333105	Active TSS Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
9	nsv516274	chr6:66309315-66326945	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
10	nsv462987	chr6:66309688-66340432	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
11	nsv603445	chr6:66309688-66340432	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
12	nsv462988	chr6:66314150-66340432	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
13	nsv603446	chr6:66314150-66340432	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
14	nsv603447	chr6:66321191-66346089	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:66318800-66321400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
2	chr6:66320800-66321200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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