The 2.0 version of rSNPBase

Variant report

Variant rs547322449
Chromosome Location chr10:89823106-89823107
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:89819400-89830400 Enhancers Primary T cells from cord blood blood
2 chr10:89819800-89823200 Enhancers Primary Natural Killer cells fromperipheralblood blood
3 chr10:89819800-89826400 Enhancers Primary T helper naive cells fromperipheralblood blood
4 chr10:89819800-89828200 Enhancers Primary T cells fromperipheralblood blood
5 chr10:89819800-89832800 Enhancers Primary B cells from peripheral blood blood
6 chr10:89820000-89826200 Enhancers Primary T helper cells PMA-I stimulated --
7 chr10:89820000-89826400 Enhancers Primary B cells from cord blood blood
8 chr10:89820800-89824600 Weak transcription Spleen Spleen
9 chr10:89820800-89829400 Enhancers Primary T helper cells fromperipheralblood blood
10 chr10:89820800-89832400 Enhancers Primary monocytes fromperipheralblood blood
11 chr10:89821000-89823800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr10:89821000-89823800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
13 chr10:89821400-89823800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr10:89821400-89828400 Enhancers Primary hematopoietic stem cells short term culture blood
15 chr10:89821600-89823200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr10:89821600-89823200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr10:89821600-89823200 Enhancers Right Atrium heart
18 chr10:89821600-89823600 Flanking Active TSS Primary neutrophils fromperipheralblood blood
19 chr10:89821600-89823600 Enhancers Duodenum Mucosa Duodenum
20 chr10:89821600-89824400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr10:89821600-89825400 Enhancers Breast Myoepithelial Primary Cells Breast
22 chr10:89821600-89826400 Enhancers Adipose Nuclei Adipose
23 chr10:89821600-89826400 Enhancers Fetal Lung lung
24 chr10:89821600-89828000 Enhancers Primary hematopoietic stem cells blood
25 chr10:89821600-89830800 Enhancers Fetal Thymus thymus
26 chr10:89822000-89823200 Enhancers Psoas Muscle Psoas
27 chr10:89822000-89823200 Enhancers Right Ventricle heart
28 chr10:89822000-89823400 Enhancers Left Ventricle heart
29 chr10:89822000-89823400 Enhancers NH-A brain
30 chr10:89822000-89823600 Enhancers Placenta Placenta
31 chr10:89822000-89825400 Enhancers Skeletal Muscle Female skeletal muscle
32 chr10:89822000-89825600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
33 chr10:89822000-89826000 Enhancers Liver Liver
34 chr10:89822000-89828200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
35 chr10:89822000-89828400 Enhancers Thymus Thymus
36 chr10:89822000-89829600 Enhancers Primary T killer naive cells fromperipheralblood blood
37 chr10:89822200-89823200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr10:89822200-89823200 Enhancers Muscle Satellite Cultured Cells --
39 chr10:89822200-89823200 Enhancers Gastric stomach
40 chr10:89822200-89823200 Enhancers Lung lung
41 chr10:89822200-89823200 Enhancers Ovary ovary
42 chr10:89822200-89823200 Enhancers Pancreas Pancrea
43 chr10:89822200-89823200 Enhancers A549 lung
44 chr10:89822200-89823200 Flanking Active TSS Dnd41 blood
45 chr10:89822200-89823200 Enhancers Hela-S3 cervix
46 chr10:89822200-89823400 Enhancers Fetal Muscle Leg muscle
47 chr10:89822200-89823400 Enhancers Rectal Smooth Muscle rectum
48 chr10:89822200-89823400 Enhancers Stomach Mucosa stomach
49 chr10:89822200-89823400 Enhancers Stomach Smooth Muscle stomach
50 chr10:89822200-89823400 Enhancers Osteobl bone

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Last update: Aug 31, 2015