Variant report

Variant	rs547568584
Chromosome Location	chr8:35568686-35568687
allele	-/TTTTGTTTTG/TTTTGTTTTGTTTTG
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:11 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1017085	chr8:34742896-35594241	Enhancers Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv539546	chr8:34742896-35594241	Weak transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv533420	chr8:35358115-36227536	Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
4	nsv831285	chr8:35485874-35648117	Weak transcription Enhancers Strong transcription Bivalent Enhancer Active TSS Genic enhancers Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
5	esv2754662	chr8:35558658-35648958	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
6	nsv1032540	chr8:35565491-35949132	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
7	esv2483846	chr8:35568032-35569365	Weak transcription	n/a	n/a	inside rSNPs	diseases
8	esv1962769	chr8:35568247-35568773	Weak transcription	n/a	n/a	inside rSNPs	diseases
9	esv3346773	chr8:35568261-35568699	Weak transcription	n/a	n/a	inside rSNPs	diseases
10	esv3486343	chr8:35568292-35568725	Weak transcription	n/a	n/a	inside rSNPs	diseases
11	esv3486340	chr8:35568327-35568705	Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:35531000-35579600	Weak transcription	Fetal Brain Female	brain
2	chr8:35538000-35575200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
3	chr8:35547400-35579800	Weak transcription	Cortex derived primary cultured neurospheres	brain
4	chr8:35564000-35573400	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr8:35564800-35573400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
6	chr8:35565000-35573400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
7	chr8:35565200-35573600	Weak transcription	H1 Cell Line	embryonic stem cell
8	chr8:35565200-35573800	Weak transcription	HUES64 Cell Line	embryonic stem cell
9	chr8:35565400-35576200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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