Variant report

Variant rs549546966
Chromosome Location chr6:31235621-31235622
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:31228200-31235800 Weak transcription Fetal Thymus thymus
2 chr6:31232600-31236800 Weak transcription Skeletal Muscle Male skeletal muscle
3 chr6:31232800-31235800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr6:31233200-31235800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr6:31233200-31235800 Weak transcription Placenta Placenta
6 chr6:31233200-31236000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr6:31233200-31236600 Weak transcription HMEC breast
8 chr6:31233200-31238200 Weak transcription Stomach Mucosa stomach
9 chr6:31233200-31238400 Weak transcription Small Intestine intestine
10 chr6:31233400-31235800 Weak transcription Primary monocytes fromperipheralblood blood
11 chr6:31233400-31235800 Weak transcription Adipose Nuclei Adipose
12 chr6:31233400-31235800 Weak transcription GM12878-XiMat blood
13 chr6:31233400-31236200 Weak transcription Primary hematopoietic stem cells short term culture blood
14 chr6:31233600-31235800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr6:31233600-31236400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr6:31233800-31236000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr6:31233800-31236400 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr6:31233800-31236600 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr6:31233800-31236800 Weak transcription Stomach Smooth Muscle stomach
20 chr6:31234000-31235800 Weak transcription Esophagus oesophagus
21 chr6:31234000-31235800 Weak transcription Gastric stomach
22 chr6:31234000-31236000 Weak transcription Primary B cells from cord blood blood
23 chr6:31234000-31236200 Weak transcription Aorta Aorta
24 chr6:31234000-31236800 Weak transcription Rectal Smooth Muscle rectum
25 chr6:31234000-31237000 Weak transcription Colon Smooth Muscle Colon
26 chr6:31234200-31235800 Weak transcription Thymus Thymus
27 chr6:31234200-31236200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
28 chr6:31234200-31236600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr6:31234200-31236600 Weak transcription Osteobl bone
30 chr6:31234400-31236200 Weak transcription Placenta Amnion Placenta Amnion
31 chr6:31234400-31236400 Weak transcription HUES6 Cell Line embryonic stem cell
32 chr6:31234400-31236800 Weak transcription HUES64 Cell Line embryonic stem cell
33 chr6:31234400-31237000 Weak transcription Ovary ovary
34 chr6:31234600-31235800 Enhancers Primary B cells from peripheral blood blood
35 chr6:31234600-31236200 Weak transcription H9 Cell Line embryonic stem cell
36 chr6:31234600-31236200 Weak transcription Brain Anterior Caudate brain
37 chr6:31234600-31236200 Weak transcription Brain Hippocampus Middle brain
38 chr6:31234600-31236200 Weak transcription Lung lung
39 chr6:31234600-31236400 Weak transcription HUES48 Cell Line embryonic stem cell
40 chr6:31234600-31236800 Weak transcription Dnd41 blood
41 chr6:31234800-31235800 Enhancers Primary T helper naive cells from peripheral blood blood
42 chr6:31234800-31235800 Weak transcription NHLF lung
43 chr6:31234800-31236400 Weak transcription NHDF-Ad bronchial
44 chr6:31234800-31237400 Weak transcription iPS-15b Cell Line embryonic stem cell
45 chr6:31235000-31235800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr6:31235000-31236600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
47 chr6:31235000-31236600 Weak transcription Right Ventricle heart
48 chr6:31235000-31238600 Weak transcription HSMM muscle
49 chr6:31235200-31235800 Enhancers Primary T helper naive cells fromperipheralblood blood
50 chr6:31235200-31236000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood

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