Variant report

Variant	rs549822168
Chromosome Location	chr6:31797823-31797824
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:182)
CpG islands
(count:61)
Chromatin interactive
region (count:23)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:182 , 50 per page) page: 1 2 3 4

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr6:31797694-31798092	A549	lung:	n/a	n/a
2	MAFF	chr6:31797677-31799776	K562	blood:	n/a	chr6:31798379-31798397
3	CTCF	chr6:31797794-31798015	SK-N-SH_RA	brain:	n/a	n/a
4	RAD21	chr6:31797551-31798256	HCT-116	colon:	n/a	n/a
5	BACH1	chr6:31797607-31799758	K562	blood:	n/a	n/a
6	CTCF	chr6:31797820-31797970	Hela-S3	cervix:	n/a	n/a
7	CTCF	chr6:31797820-31797970	GM12871	blood:	n/a	n/a
8	CTCF	chr6:31797800-31797950	GM12864	blood:	n/a	n/a
9	CTCF	chr6:31797820-31797970	HPAF	blood vessel:	n/a	n/a
10	CTCF	chr6:31797820-31797970	HEEpiC	esophagus:	n/a	n/a
11	MBD4	chr6:31797566-31798272	HepG2	liver:	n/a	n/a
12	CHD2	chr6:31797617-31800276	K562	blood:	n/a	chr6:31798298-31798308
13	MXI1	chr6:31797726-31797876	HepG2	liver:	n/a	n/a
14	RAD21	chr6:31797428-31798563	SK-N-SH	brain:	n/a	n/a
15	RAD21	chr6:31797611-31798074	Hela-S3	cervix:	n/a	n/a
16	FOS	chr6:31797798-31798027	MCF10A-Er-Src	breast:	n/a	n/a
17	CTCF	chr6:31797819-31797992	Spleen_OC	spleen:	n/a	n/a
18	CTCF	chr6:31797680-31798110	IMR90	lung:	n/a	n/a
19	POLR2A	chr6:31797557-31797929	K562	blood:	n/a	n/a
20	CCNT2	chr6:31797488-31797860	K562	blood:	n/a	n/a
21	CTCF	chr6:31797681-31798085	GM12878	blood:	n/a	n/a
22	CTCF	chr6:31797803-31797959	K562	blood:	n/a	n/a
23	ZNF384	chr6:31797556-31799109	K562	blood:	n/a	n/a
24	MYC	chr6:31797646-31798090	MCF10A-Er-Src	breast:	n/a	n/a
25	CTCF	chr6:31797820-31797970	AG09319	gingival:	n/a	n/a
26	STAT3	chr6:31797817-31798017	MCF10A-Er-Src	breast:	n/a	n/a
27	RAD21	chr6:31797698-31798033	GM12878	blood:	n/a	n/a
28	RAD21	chr6:31797637-31798067	ECC-1	luminal epithelium:	n/a	n/a
29	POLR2A	chr6:31794277-31797933	K562	blood:	n/a	n/a
30	NR2F2	chr6:31794226-31797982	K562	blood:	n/a	n/a
31	CTCF	chr6:31797800-31797950	WERI-Rb-1	eye:	n/a	n/a
32	CTCF	chr6:31797657-31798007	H1-hESC	embryonic stem cell:	n/a	n/a
33	POLR2A	chr6:31797433-31800272	K562	blood:	n/a	n/a
34	MYBL2	chr6:31797632-31798217	HepG2	liver:	n/a	n/a
35	SIN3AK20	chr6:31797496-31797947	PANC-1	pancreas:	n/a	n/a
36	CTCF	chr6:31797800-31797950	AG04449	skin:	n/a	n/a
37	POLR2A	chr6:31797586-31797997	H1-neurons	neurons:	n/a	n/a
38	CTCF	chr6:31797481-31798454	SK-N-SH	brain:	n/a	n/a
39	CTCF	chr6:31797780-31797930	HCFaa	heart:	n/a	n/a
40	FOXA2	chr6:31797600-31798030	HepG2	liver:	n/a	n/a
41	EBF1	chr6:31797457-31798145	GM12878	blood:	n/a	chr6:31797603-31797614
42	CHD1	chr6:31797607-31798081	GM12878	blood:	n/a	n/a
43	ZNF384	chr6:31797654-31798580	GM12878	blood:	n/a	n/a
44	CTCF	chr6:31797800-31797950	GM12868	blood:	n/a	n/a
45	JUND	chr6:31797677-31798040	K562	blood:	n/a	n/a
46	CTCF	chr6:31797631-31798115	K562	blood:	n/a	n/a
47	CTCF	chr6:31797700-31797850	HBMEC	blood vessel:	n/a	n/a
48	CTCF	chr6:31797800-31797950	HMEC	breast:	n/a	n/a
49	CTCF	chr6:31797780-31797930	GM12871	blood:	n/a	n/a
50	TEAD4	chr6:31797538-31798276	K562	blood:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:31797821-31797871	MCF10A-Er-Src	breast:	n/a
2	chr6:31797821-31797871	AG09309	skin:	n/a
3	chr6:31797821-31797871	HRPEpiC	eye:	n/a
4	chr6:31797821-31797871	LNCaP	prostate:	n/a
5	chr6:31797821-31797871	MCF-7	breast:	n/a
6	chr6:31797821-31797871	ovcar-3	ovarian:	n/a
7	chr6:31797821-31797871	SKMC	muscle:	n/a
8	chr6:31797821-31797871	HRE	kidney:	n/a
9	chr6:31797821-31797871	K562	blood:	n/a
10	chr6:31797821-31797871	BJ	skin:	n/a
11	chr6:31797821-31797871	T-47D	breast:	n/a
12	chr6:31797821-31797871	SK-N-MC	brain:	n/a
13	chr6:31797821-31797871	SK-N-SH	brain:	n/a
14	chr6:31797821-31797871	HEEpiC	esophagus:	n/a
15	chr6:31797821-31797871	Hela-S3	cervix:	n/a
16	chr6:31797821-31797871	NT2-D1	testis:	n/a
17	chr6:31797821-31797871	PrEC	prostate:	n/a
18	chr6:31797821-31797871	SK-N-SH_RA	brain:	n/a
19	chr6:31797821-31797871	H1-hESC	embryonic stem cell:	embryo
20	chr6:31797821-31797871	HNPCEpiC	eye:	n/a
21	chr6:31797821-31797871	NHDF-neo	bronchial:	n/a
22	chr6:31797821-31797871	CMK	blood:	n/a
23	chr6:31797821-31797871	NHBE	bronchial:	n/a
24	chr6:31797821-31797871	HUVEC	blood vessel:	n/a
25	chr6:31797821-31797871	HepG2	liver:	n/a
26	chr6:31797821-31797871	HMEC	breast:	n/a
27	chr6:31797821-31797871	A549	lung:	n/a
28	chr6:31797821-31797871	Jurkat	blood:	n/a
29	chr6:31797821-31797871	PANC-1	pancreas:	n/a
30	chr6:31797821-31797871	PFSK-1	brain:	n/a
31	chr6:31797821-31797871	GM12891	blood:	n/a
32	chr6:31797821-31797871	SAEC	small airway:	n/a
33	chr6:31797821-31797871	HRCEpiC	kidney:	n/a
34	chr6:31797821-31797871	AG10803	skin:	n/a
35	chr6:31797821-31797871	NH-A	brain:	n/a
36	chr6:31797821-31797871	HPAEpiC	pulmonary alveolar:	n/a
37	chr6:31797821-31797871	HL-60	blood:	n/a
38	chr6:31797821-31797871	HCT-116	colon:	n/a
39	chr6:31797821-31797871	AoSMC	blood vessel:	n/a
40	chr6:31797821-31797871	HAEpiC	amniotic membrane:	n/a
41	chr6:31797821-31797871	HCF	heart:	n/a
42	chr6:31797821-31797871	GM12878	blood:	n/a
43	chr6:31797821-31797871	AG09319	gingival:	n/a
44	chr6:31797821-31797871	U87	brain:	n/a
45	chr6:31797821-31797871	IMR90	lung:	fetal
46	chr6:31797821-31797871	GM06990	blood:	n/a
47	chr6:31797821-31797871	HCM	heart:	n/a
48	chr6:31797821-31797871	ECC-1	luminal epithelium:	n/a
49	chr6:31797821-31797871	RPTEC	kidney:	n/a
50	chr6:31797821-31797871	ProgFib	skin:	n/a

(count:23 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:31796727..31799560-chr6:31913553..31916544,2	MCF-7	breast:
2	chr6:31740405..31741321-chr6:31797365..31798460,3	MCF-7	breast:
3	chr6:31797497..31799469-chr6:31830033..31833133,3	MCF-7	breast:
4	chr6:31795326..31798240-chr6:31869248..31870828,2	K562	blood:
5	chr6:31737226..31750413-chr6:31786206..31805473,50	MCF-7	breast:
6	chr6:31508088..31512302-chr6:31792582..31797881,5	K562	blood:
7	chr6:31795475..31798260-chr6:31864062..31867064,3	K562	blood:
8	chr6:31793612..31800139-chr6:31830250..31833240,9	K562	blood:
9	chr6:31797792..31800637-chr6:32096282..32098134,2	K562	blood:
10	chr16:89988437..89990274-chr6:31795215..31797917,2	MCF-7	breast:
11	chr6:31795636..31798245-chr6:31918876..31922534,3	MCF-7	breast:
12	chr6:31706679..31708956-chr6:31795250..31798080,2	MCF-7	breast:
13	chr6:31686048..31689889-chr6:31795401..31797897,4	MCF-7	breast:
14	chr6:31797405..31799206-chr6:31828382..31830105,2	K562	blood:
15	chr6:31795540..31798054-chr6:31844082..31846588,3	K562	blood:
16	chr6:31740578..31741288-chr6:31797704..31798376,4	MCF-7	breast:
17	chr6:31648223..31648743-chr6:31797705..31798338,2	K562	blood:
18	chr6:31586894..31588593-chr6:31796465..31799455,2	MCF-7	breast:
19	chr6:31696240..31698841-chr6:31797761..31799583,2	MCF-7	breast:
20	chr6:31756951..31764627-chr6:31780500..31799197,32	MCF-7	breast:
21	chr15:50646997..50647926-chr6:31797241..31797843,2	Hela-S3	cervix:
22	chr6:31758502..31767561-chr6:31786193..31804196,52	MCF-7	breast:
23	chr6:31796169..31798718-chr6:31855458..31858224,2	MCF-7	breast:

No data

Variant related genes	Relation type
C6orf48	TF binding region
C6orf48	CpG island
ENSG00000204421	Chromatin interaction
ENSG00000204366	Chromatin interaction
ENSG00000244879	Chromatin interaction
ENSG00000204385	Chromatin interaction
ENSG00000204394	Chromatin interaction
ENSG00000204386	Chromatin interaction
ENSG00000234006	Chromatin interaction
ENSG00000259006	Chromatin interaction
ENSG00000243649	Chromatin interaction
ENSG00000265236	Chromatin interaction
ENSG00000204371	Chromatin interaction
ENSG00000204420	Chromatin interaction
ENSG00000213722	Chromatin interaction
ENSG00000213719	Chromatin interaction
ENSG00000258947	Chromatin interaction
ENSG00000166278	Chromatin interaction
ENSG00000201555	Chromatin interaction
ENSG00000198563	Chromatin interaction
ENSG00000204410	Chromatin interaction
ENSG00000255152	Chromatin interaction
ENSG00000104064	Chromatin interaction
ENSG00000204469	Chromatin interaction
ENSG00000204315	Chromatin interaction
ENSG00000204396	Chromatin interaction

Extended variants
information (count: 32 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:32 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv601609	chr6:31280101-31799786	Active TSS Flanking Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Enhancers Genic enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	332 gene(s)	inside rSNPs	diseases
2	nsv601610	chr6:31280101-31960770	Enhancers Flanking Active TSS Weak transcription Genic enhancers Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	370 gene(s)	inside rSNPs	diseases
3	nsv601628	chr6:31280327-31990098	Weak transcription Transcr. at gene 5' and 3' Active TSS Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	376 gene(s)	inside rSNPs	diseases
4	nsv601629	chr6:31280327-31996185	Strong transcription Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	376 gene(s)	inside rSNPs	diseases
5	nsv601630	chr6:31280327-32011317	Genic enhancers Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	378 gene(s)	inside rSNPs	diseases
6	nsv601631	chr6:31280327-32017540	Genic enhancers Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	378 gene(s)	inside rSNPs	diseases
7	nsv1023939	chr6:31325961-32026747	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	372 gene(s)	inside rSNPs	diseases
8	nsv538188	chr6:31325961-32026747	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	372 gene(s)	inside rSNPs	diseases
9	nsv1021747	chr6:31386219-31907266	Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Enhancers Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	330 gene(s)	inside rSNPs	diseases
10	nsv1033154	chr6:31550614-32009410	Strong transcription Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	326 gene(s)	inside rSNPs	diseases
11	nsv1017945	chr6:31609641-32481240	Genic enhancers Weak transcription Transcr. at gene 5' and 3' Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	322 gene(s)	inside rSNPs	diseases
12	esv3428142	chr6:31615800-31881809	Flanking Active TSS Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	257 gene(s)	inside rSNPs	diseases
13	nsv884426	chr6:31728102-31800868	Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	139 gene(s)	inside rSNPs	diseases
14	nsv884427	chr6:31728102-31802465	Enhancers Flanking Active TSS Active TSS Weak transcription Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	152 gene(s)	inside rSNPs	diseases
15	nsv884428	chr6:31728102-31870326	Enhancers Weak transcription Strong transcription Active TSS Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	162 gene(s)	inside rSNPs	diseases
16	nsv884429	chr6:31730356-31837066	Enhancers Transcr. at gene 5' and 3' Strong transcription Active TSS Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	155 gene(s)	inside rSNPs	diseases
17	nsv884430	chr6:31731881-31800631	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	139 gene(s)	inside rSNPs	diseases
18	nsv462872	chr6:31778272-31864304	Enhancers Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	144 gene(s)	inside rSNPs	diseases
19	nsv601945	chr6:31778272-31864304	Flanking Active TSS Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	144 gene(s)	inside rSNPs	diseases
20	nsv884451	chr6:31783527-31800631	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	105 gene(s)	inside rSNPs	diseases
21	nsv884456	chr6:31785228-31800631	Active TSS Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	97 gene(s)	inside rSNPs	diseases
22	nsv884457	chr6:31785228-31803130	Enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	114 gene(s)	inside rSNPs	diseases
23	nsv601950	chr6:31785438-32492308	Enhancers Bivalent Enhancer Active TSS Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	197 gene(s)	inside rSNPs	diseases
24	nsv601951	chr6:31785438-32496748	Enhancers Flanking Active TSS Strong transcription Weak transcription Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	197 gene(s)	inside rSNPs	diseases
25	nsv884461	chr6:31785453-31827045	Enhancers Flanking Active TSS Active TSS Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	117 gene(s)	inside rSNPs	diseases
26	nsv601955	chr6:31785453-32484368	Genic enhancers Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	196 gene(s)	inside rSNPs	diseases
27	nsv601956	chr6:31785453-32492308	Strong transcription Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	197 gene(s)	inside rSNPs	diseases
28	nsv462874	chr6:31794592-31864304	Enhancers Weak transcription Genic enhancers Active TSS Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	118 gene(s)	inside rSNPs	diseases
29	nsv601959	chr6:31794592-31864304	Strong transcription Enhancers Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	118 gene(s)	inside rSNPs	diseases
30	esv3329350	chr6:31794973-31799171	Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	81 gene(s)	inside rSNPs	diseases
31	nsv969380	chr6:31797103-31797836	Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region miRNA target site	29 gene(s)	inside rSNPs	diseases
32	nsv884463	chr6:31797422-31827045	Active TSS Enhancers Flanking Active TSS Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:31795800-31798800	Weak transcription	Spleen	Spleen
2	chr6:31797200-31798200	Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr6:31797200-31798200	Active TSS	Fetal Muscle Leg	muscle
4	chr6:31797200-31798400	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr6:31797200-31798400	Active TSS	Primary T helper 17 cells PMA-I stimulated	--
6	chr6:31797200-31798400	Bivalent/Poised TSS	Brain Germinal Matrix	brain
7	chr6:31797200-31798400	Active TSS	Fetal Muscle Trunk	muscle
8	chr6:31797200-31798400	Active TSS	Skeletal Muscle Male	skeletal muscle
9	chr6:31797200-31798600	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
10	chr6:31797200-31798600	Active TSS	Primary hematopoietic stem cells short term culture	blood
11	chr6:31797200-31798600	Active TSS	Primary T helper naive cells from peripheral blood	blood
12	chr6:31797200-31798600	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
13	chr6:31797200-31798600	Active TSS	Muscle Satellite Cultured Cells	--
14	chr6:31797200-31798600	Active TSS	Brain Anterior Caudate	brain
15	chr6:31797200-31798600	Active TSS	Colon Smooth Muscle	Colon
16	chr6:31797200-31798600	Active TSS	Fetal Lung	lung
17	chr6:31797200-31798600	Active TSS	Placenta	Placenta
18	chr6:31797200-31798600	Active TSS	Fetal Stomach	stomach
19	chr6:31797200-31798600	Active TSS	Rectal Mucosa Donor 29	rectum
20	chr6:31797200-31798600	Active TSS	Right Atrium	heart
21	chr6:31797200-31798600	Active TSS	Skeletal Muscle Female	skeletal muscle
22	chr6:31797200-31798600	Active TSS	Stomach Smooth Muscle	stomach
23	chr6:31797200-31798600	Active TSS	Hela-S3	cervix
24	chr6:31797200-31798600	Active TSS	NH-A	brain
25	chr6:31797200-31798600	Active TSS	NHDF-Ad	bronchial
26	chr6:31797200-31798800	Active TSS	H1 Cell Line	embryonic stem cell
27	chr6:31797200-31798800	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
28	chr6:31797200-31798800	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
29	chr6:31797200-31798800	Active TSS	HUES6 Cell Line	embryonic stem cell
30	chr6:31797200-31798800	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
31	chr6:31797200-31798800	Active TSS	iPS-18 Cell Line	embryonic stem cell
32	chr6:31797200-31798800	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
33	chr6:31797200-31798800	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
34	chr6:31797200-31798800	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
35	chr6:31797200-31798800	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
36	chr6:31797200-31798800	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
37	chr6:31797200-31798800	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
38	chr6:31797200-31798800	Active TSS	Cortex derived primary cultured neurospheres	brain
39	chr6:31797200-31798800	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
40	chr6:31797200-31798800	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
41	chr6:31797200-31798800	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
42	chr6:31797200-31798800	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
43	chr6:31797200-31798800	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
44	chr6:31797200-31798800	Active TSS	Aorta	Aorta
45	chr6:31797200-31798800	Active TSS	Brain Angular Gyrus	brain
46	chr6:31797200-31798800	Active TSS	Brain Hippocampus Middle	brain
47	chr6:31797200-31798800	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
48	chr6:31797200-31798800	Active TSS	Brain Substantia Nigra	brain
49	chr6:31797200-31798800	Active TSS	Colonic Mucosa	Colon
50	chr6:31797200-31798800	Active TSS	Duodenum Mucosa	Duodenum

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