Variant report

Variant rs550265310
Chromosome Location chr6:140382132-140382133
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:28 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:140373600-140384200 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr6:140374200-140383800 Weak transcription Fetal Brain Female brain
3 chr6:140374800-140382400 Weak transcription Placenta Amnion Placenta Amnion
4 chr6:140375000-140383800 Weak transcription Brain Germinal Matrix brain
5 chr6:140378000-140383000 Weak transcription Psoas Muscle Psoas
6 chr6:140379400-140383600 Enhancers Hela-S3 cervix
7 chr6:140379800-140385200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
8 chr6:140380000-140385200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr6:140380000-140385800 Enhancers NHDF-Ad bronchial
10 chr6:140380200-140382600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr6:140380400-140383800 Enhancers Muscle Satellite Cultured Cells --
12 chr6:140380600-140382400 Weak transcription Adipose Nuclei Adipose
13 chr6:140380600-140382600 Weak transcription A549 lung
14 chr6:140380600-140386400 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr6:140380800-140382800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr6:140380800-140383400 Enhancers HMEC breast
17 chr6:140380800-140385000 Enhancers NHLF lung
18 chr6:140381000-140384600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr6:140381000-140385200 Enhancers HSMM muscle
20 chr6:140381200-140382200 Weak transcription Placenta Placenta
21 chr6:140381200-140383400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr6:140381200-140385800 Enhancers Breast Myoepithelial Primary Cells Breast
23 chr6:140381800-140383400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr6:140381800-140385000 Enhancers Osteobl bone
25 chr6:140382000-140383000 Enhancers NH-A brain
26 chr6:140382000-140383200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
27 chr6:140382000-140384400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
28 chr6:140382000-140384600 Enhancers NHEK skin

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