Variant report

Variant	esv3473488
Chromosome Location	chr6:140380690-140392319
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:219)
CpG islands
(count:61)
Chromatin interactive
region (count:12)
LncRNA
region (count:5)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:219 , 50 per page) page: 1 2 3 4 5

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CEBPB	chr6:140392234-140393394	Hela-S3	cervix:	n/a	n/a
2	CEBPB	chr6:140382674-140383633	IMR90	lung:	n/a	n/a
3	CEBPB	chr6:140383122-140383702	A549	lung:	n/a	n/a
4	CEBPB	chr6:140383264-140383589	A549	lung:	n/a	n/a
5	CEBPB	chr6:140382383-140383927	Hela-S3	cervix:	n/a	chr6:140382445-140382458
6	CEBPB	chr6:140383052-140384107	MCF-7	breast:	n/a	n/a
7	CEBPB	chr6:140392168-140392714	MCF-7	breast:	n/a	n/a
8	CEBPB	chr6:140383239-140383866	MCF-7	breast:	n/a	n/a
9	CEBPB	chr6:140383210-140383614	A549	lung:	n/a	n/a
10	CHD2	chr6:140392316-140393255	Hela-S3	cervix:	n/a	n/a
11	CHD2	chr6:140383177-140383739	Hela-S3	cervix:	n/a	n/a
12	CTCF	chr6:140382500-140382650	HMF	breast:	n/a	n/a
13	CTCF	chr6:140385660-140385810	HCPEpiC	choroid plexus:	n/a	n/a
14	CTCF	chr6:140382680-140382830	HBMEC	blood vessel:	n/a	n/a
15	CTCF	chr6:140385620-140385770	Caco-2	colon:	n/a	n/a
16	CTCF	chr6:140382520-140382670	HCM	heart:	n/a	n/a
17	CTCF	chr6:140382560-140382710	NHDF-neo	bronchial:	n/a	n/a
18	CTCF	chr6:140382600-140382750	BJ	skin:	n/a	n/a
19	CTCF	chr6:140385720-140385777	Kidney_OC	kidney:	n/a	n/a
20	CTCF	chr6:140382600-140382750	HPF	lung:	n/a	n/a
21	CTCF	chr6:140382640-140382790	AG10803	skin:	n/a	n/a
22	CTCF	chr6:140382620-140382770	AG10803	skin:	n/a	n/a
23	CTCF	chr6:140382640-140382790	AG04449	skin:	n/a	n/a
24	CTCF	chr6:140382660-140382810	HBMEC	blood vessel:	n/a	n/a
25	CTCF	chr6:140382620-140382770	HVMF	connective:	n/a	n/a
26	CTCF	chr6:140385540-140385690	RPTEC	kidney:	n/a	n/a
27	CTCF	chr6:140385600-140385750	HCPEpiC	choroid plexus:	n/a	n/a
28	CTCF	chr6:140382640-140382790	HCPEpiC	choroid plexus:	n/a	n/a
29	CTCF	chr6:140382640-140382790	AG09309	skin:	n/a	n/a
30	CTCF	chr6:140382660-140382810	HPAF	blood vessel:	n/a	n/a
31	CTCF	chr6:140382620-140382770	HPF	lung:	n/a	n/a
32	CTCF	chr6:140382680-140382830	HAc	cerebellar:	n/a	n/a
33	CTCF	chr6:140382680-140382830	AG09319	gingival:	n/a	n/a
34	CTCF	chr6:140382640-140382790	HCFaa	heart:	n/a	n/a
35	CTCF	chr6:140382760-140382910	NHDF-neo	bronchial:	n/a	n/a
36	CUX1	chr6:140385597-140385629	K562	blood:	n/a	n/a
37	E2F4	chr6:140384499-140384504	MCF10A-Er-Src	breast:	n/a	n/a
38	EP300	chr6:140383571-140383917	SK-N-SH_RA	brain:	n/a	n/a
39	EP300	chr6:140382931-140383450	SK-N-SH_RA	brain:	n/a	chr6:140383430-140383444
40	EP300	chr6:140384047-140384179	HepG2	liver:	n/a	n/a
41	EP300	chr6:140392263-140392661	SK-N-SH_RA	brain:	n/a	n/a
42	EP300	chr6:140383166-140384066	MCF-7	breast:	n/a	chr6:140383430-140383444
43	EP300	chr6:140391912-140393685	SK-N-SH	brain:	n/a	chr6:140393627-140393636 chr6:140393626-140393640 chr6:140393598-140393608
44	EP300	chr6:140392197-140393535	SK-N-SH_RA	brain:	n/a	n/a
45	EP300	chr6:140383567-140383963	SK-N-SH_RA	brain:	n/a	n/a
46	EP300	chr6:140382946-140383514	SK-N-SH_RA	brain:	n/a	chr6:140383430-140383444
47	EP300	chr6:140382685-140383971	Hela-S3	cervix:	n/a	chr6:140383430-140383444
48	EP300	chr6:140382792-140384177	SK-N-SH	brain:	n/a	chr6:140383430-140383444
49	EP300	chr6:140392024-140393656	SK-N-SH	brain:	n/a	chr6:140393627-140393636 chr6:140393626-140393640 chr6:140393598-140393608
50	EP300	chr6:140392252-140393359	Hela-S3	cervix:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:140383629-140383679	HEEpiC	esophagus:	n/a
2	chr6:140383629-140383679	HRE	kidney:	n/a
3	chr6:140383629-140383679	BE2_C	brain:	n/a
4	chr6:140383629-140383679	MCF-7	breast:	n/a
5	chr6:140383629-140383679	PrEC	prostate:	n/a
6	chr6:140383629-140383679	LNCaP	prostate:	n/a
7	chr6:140383629-140383679	AG10803	skin:	n/a
8	chr6:140383629-140383679	SK-N-MC	brain:	n/a
9	chr6:140383629-140383679	HCT-116	colon:	n/a
10	chr6:140383629-140383679	HIPEpiC	eye:	n/a
11	chr6:140383629-140383679	GM06990	blood:	n/a
12	chr6:140383629-140383679	Caco-2	colon:	n/a
13	chr6:140383629-140383679	HRCEpiC	kidney:	n/a
14	chr6:140383629-140383679	A549	lung:	n/a
15	chr6:140383629-140383679	Hela-S3	cervix:	n/a
16	chr6:140383629-140383679	AoSMC	blood vessel:	n/a
17	chr6:140383629-140383679	HCPEpiC	choroid plexus:	n/a
18	chr6:140383629-140383679	Hepatocyte	liver:	n/a
19	chr6:140383629-140383679	HCM	heart:	n/a
20	chr6:140383629-140383679	AG09319	gingival:	n/a
21	chr6:140383629-140383679	NHDF-neo	bronchial:	n/a
22	chr6:140383629-140383679	HUVEC	blood vessel:	n/a
23	chr6:140383629-140383679	SK-N-SH	brain:	n/a
24	chr6:140383629-140383679	SK-N-SH_RA	brain:	n/a
25	chr6:140383629-140383679	BJ	skin:	n/a
26	chr6:140383629-140383679	PANC-1	pancreas:	n/a
27	chr6:140383629-140383679	NB4	blood:	n/a
28	chr6:140383629-140383679	PFSK-1	brain:	n/a
29	chr6:140383629-140383679	ECC-1	luminal epithelium:	n/a
30	chr6:140383629-140383679	NH-A	brain:	n/a
31	chr6:140383629-140383679	SKMC	muscle:	n/a
32	chr6:140383629-140383679	GM12891	blood:	n/a
33	chr6:140383629-140383679	AG04450	lung:	fetal
34	chr6:140383629-140383679	MCF10A-Er-Src	breast:	n/a
35	chr6:140383629-140383679	GM12878	blood:	n/a
36	chr6:140383629-140383679	HCF	heart:	n/a
37	chr6:140383629-140383679	RPTEC	kidney:	n/a
38	chr6:140383629-140383679	HPAEpiC	pulmonary alveolar:	n/a
39	chr6:140383629-140383679	SAEC	small airway:	n/a
40	chr6:140383629-140383679	AG04449	skin:	fetal
41	chr6:140383629-140383679	H1-hESC	embryonic stem cell:	embryo
42	chr6:140383629-140383679	CMK	blood:	n/a
43	chr6:140383629-140383679	GM12892	blood:	n/a
44	chr6:140383629-140383679	K562	blood:	n/a
45	chr6:140383629-140383679	GM19239	blood:	n/a
46	chr6:140383629-140383679	ProgFib	skin:	n/a
47	chr6:140383629-140383679	ovcar-3	ovarian:	n/a
48	chr6:140383629-140383679	AG09309	skin:	n/a
49	chr6:140383629-140383679	HMEC	breast:	n/a
50	chr6:140383629-140383679	HEK293	kidney:	embryo

(count:12 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:140388648..140390950-chr6:140391151..140393468,2	MCF-7	breast:
2	chr6:140388648..140390950-chr6:140391151..140393468,2	MCF-7	breast:
3	chr6:140376182..140378933-chr6:140380636..140382581,2	MCF-7	breast:
4	chr6:140375571..140378188-chr6:140378713..140381591,2	K562	blood:
5	chr6:140390402..140393143-chr6:140395064..140396701,2	MCF-7	breast:
6	chr6:139695333..139696910-chr6:140382949..140384930,2	MCF-7	breast:
7	chr6:140390060..140392664-chr6:140397671..140399616,2	MCF-7	breast:
8	chr6:139695731..139697417-chr6:140391415..140394003,2	MCF-7	breast:
9	chr6:139692663..139698708-chr6:140381231..140386402,5	MCF-7	breast:
10	chr6:140385652..140387203-chr6:140390391..140391912,2	K562	blood:
11	chr6:139692809..139695953-chr6:140377824..140381210,3	MCF-7	breast:
12	chr6:140385652..140387203-chr6:140390391..140391912,2	K562	blood:

(count:5 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-HECA-3	chr6:140388587-140389017	XLOC_005485
2	lnc-HECA-3	chr6:140388574-140388777	XLOC_005485
3	lnc-HECA-3	chr6:140388571-140389212	NONHSAT115266
4	lnc-HECA-3	chr6:140388572-140389017	XLOC_005485
5	lnc-HECA-3	chr6:140388574-140389017	XLOC_005485

No data

Variant related genes	Relation type
ENSG00000236013	TF binding region
ENSG00000236013	CpG island
ENSG00000164442	chromatin interactions
PRDM16	miRNA target sites

Extended variants
information (count: 343 )
Associated
traits (count: 81 )

Variant overlapped rSNPs/rCNVs (count:343 , 50 per page) page: 1 2 3 4 5 6 7

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs149515718	chr6:140380945-140380946	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
2	rs537939018	chr6:140380963-140380964	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs556625895	chr6:140381025-140381026	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs578051192	chr6:140381071-140381072	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs182652033	chr6:140381139-140381140	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs143165573	chr6:140381163-140381164	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs539568041	chr6:140381167-140381168	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs572680866	chr6:140381278-140381279	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs546591004	chr6:140381300-140381301	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs543252217	chr6:140381321-140381322	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs373920910	chr6:140381377-140381378	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs371933967	chr6:140381404-140381405	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs561314121	chr6:140381461-140381462	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs573713051	chr6:140381586-140381587	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs187834896	chr6:140381630-140381631	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs562164352	chr6:140381663-140381664	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs532730744	chr6:140381769-140381770	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs113347840	chr6:140381865-140381866	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs73775483	chr6:140381867-140381868	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs148274939	chr6:140381960-140381961	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs549196666	chr6:140381992-140381993	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs193174082	chr6:140382069-140382070	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs538360201	chr6:140382083-140382084	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs546961244	chr6:140382118-140382119	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs200912872	chr6:140382128-140382129	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs550265310	chr6:140382132-140382133	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs9495634	chr6:140382165-140382166	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs538988462	chr6:140382190-140382191	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs142670033	chr6:140382216-140382217	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs535701587	chr6:140382256-140382257	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs555697767	chr6:140382261-140382262	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs572739467	chr6:140382282-140382283	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs17069755	chr6:140382326-140382327	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs115571827	chr6:140382413-140382414	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs184979008	chr6:140382440-140382441	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs73571540	chr6:140382453-140382454	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs578027615	chr6:140382460-140382461	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs577219458	chr6:140382537-140382538	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs544647465	chr6:140382557-140382558	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs112911374	chr6:140382566-140382567	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs559705760	chr6:140382567-140382568	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs147350913	chr6:140382571-140382572	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs548980207	chr6:140382580-140382581	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs371929070	chr6:140382626-140382627	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs561153947	chr6:140382688-140382689	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs139500955	chr6:140382725-140382726	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs143511467	chr6:140382733-140382734	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs368681123	chr6:140382741-140382742	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs80023969	chr6:140382767-140382768	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs532642660	chr6:140382812-140382813	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:81)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Autism	22495311	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Melanoma	18172304	CNVD
Cancer	21637783	CNVD
Gastric cancer	17908304	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Colorectal cancer	16272173	CNVD
Ependymoma	16718352	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	16272173	CNVD
Wilms tumour	21544195	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Zellweger syndrome	21572526	CNVD
Follicular lymphoma	20505157	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Breast cancer	17603634	CNVD
Chondromyxoid Fibroma	20696777	CNVD
Cancer	21183584	CNVD
Developmental delay	19490664	CNVD
Burkitt''s lymphoma	18698080	CNVD
Follicular lymphoma	18703704	CNVD
Neurodevelopmental disorder	22521361	CNVD
small cell lung cancer	20016488	CNVD
Adenoid cystic carcinoma	18698036	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Leukemia	18688285	CNVD
Breast cancer	21364760	CNVD
Renal cell carcinoma	18592004	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Malignant melanoma	17260012	CNVD
Prostate cancer	18632612	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Acute myeloid leukemia	21251322	CNVD
Acute monocytic leukemia	16498392	CNVD
Endocrine pancreatic tumor	17914106	CNVD
Soft tissue tumor	16732325	CNVD
Myelofibrosis	22110671	CNVD
Intellectual disability	22045946	CNVD
craniofacial dysmorphism	21918468	CNVD

Chromatin state (count:210 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:140373600-140381000	Weak transcription	HSMM	muscle
2	chr6:140373600-140384200	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr6:140374200-140383800	Weak transcription	Fetal Brain Female	brain
4	chr6:140374800-140381400	Weak transcription	NHEK	skin
5	chr6:140374800-140382400	Weak transcription	Placenta Amnion	Placenta Amnion
6	chr6:140375000-140381400	Weak transcription	NH-A	brain
7	chr6:140375000-140383800	Weak transcription	Brain Germinal Matrix	brain
8	chr6:140377400-140381200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
9	chr6:140378000-140383000	Weak transcription	Psoas Muscle	Psoas
10	chr6:140379400-140383600	Enhancers	Hela-S3	cervix
11	chr6:140379800-140385200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr6:140380000-140385200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr6:140380000-140385800	Enhancers	NHDF-Ad	bronchial
14	chr6:140380200-140382600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
15	chr6:140380400-140380800	Weak transcription	HMEC	breast
16	chr6:140380400-140383800	Enhancers	Muscle Satellite Cultured Cells	--
17	chr6:140380600-140381200	Enhancers	Placenta	Placenta
18	chr6:140380600-140382400	Weak transcription	Adipose Nuclei	Adipose
19	chr6:140380600-140382600	Weak transcription	A549	lung
20	chr6:140380600-140386400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
21	chr6:140380800-140381400	Enhancers	Osteobl	bone
22	chr6:140380800-140382800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
23	chr6:140380800-140383400	Enhancers	HMEC	breast
24	chr6:140380800-140385000	Enhancers	NHLF	lung
25	chr6:140381000-140384600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
26	chr6:140381000-140385200	Enhancers	HSMM	muscle
27	chr6:140381200-140382200	Weak transcription	Placenta	Placenta
28	chr6:140381200-140383400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
29	chr6:140381200-140385800	Enhancers	Breast Myoepithelial Primary Cells	Breast
30	chr6:140381400-140381600	Enhancers	NH-A	brain
31	chr6:140381400-140381600	Enhancers	NHEK	skin
32	chr6:140381400-140381800	Weak transcription	Osteobl	bone
33	chr6:140381600-140382000	Weak transcription	NH-A	brain
34	chr6:140381600-140382000	Weak transcription	NHEK	skin
35	chr6:140381800-140383400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
36	chr6:140381800-140385000	Enhancers	Osteobl	bone
37	chr6:140382000-140383000	Enhancers	NH-A	brain
38	chr6:140382000-140383200	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
39	chr6:140382000-140384400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
40	chr6:140382000-140384600	Enhancers	NHEK	skin
41	chr6:140382200-140383400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
42	chr6:140382200-140384000	Enhancers	HSMMtube	muscle
43	chr6:140382200-140384400	Enhancers	Placenta	Placenta
44	chr6:140382200-140384600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
45	chr6:140382200-140384600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
46	chr6:140382200-140384600	Enhancers	Fetal Lung	lung
47	chr6:140382400-140384800	Enhancers	Adipose Nuclei	Adipose
48	chr6:140382400-140386400	Enhancers	Placenta Amnion	Placenta Amnion
49	chr6:140382600-140383200	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
50	chr6:140382600-140383200	Enhancers	Ovary	ovary

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links