Variant report

Variant rs550265811
Chromosome Location chr10:116164238-116164239
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:116161800-116165000 Active TSS Breast Myoepithelial Primary Cells Breast
2 chr10:116162000-116164800 Active TSS Aorta Aorta
3 chr10:116162200-116165200 Active TSS Rectal Smooth Muscle rectum
4 chr10:116162400-116165000 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
5 chr10:116162400-116165200 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
6 chr10:116162600-116164400 Bivalent/Poised TSS Brain Substantia Nigra brain
7 chr10:116162600-116164600 Active TSS H9 Cell Line embryonic stem cell
8 chr10:116162600-116164800 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr10:116162600-116164800 Active TSS Colon Smooth Muscle Colon
10 chr10:116162600-116164800 Active TSS Fetal Kidney kidney
11 chr10:116162600-116165000 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
12 chr10:116162600-116165400 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
13 chr10:116162600-116165600 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
14 chr10:116162800-116164400 Bivalent/Poised TSS Psoas Muscle Psoas
15 chr10:116162800-116164600 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr10:116162800-116164600 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
17 chr10:116162800-116164600 Bivalent Enhancer Primary T cells fromperipheralblood blood
18 chr10:116162800-116164600 Active TSS Left Ventricle heart
19 chr10:116162800-116164600 Active TSS HMEC breast
20 chr10:116162800-116164800 Bivalent Enhancer Primary B cells from peripheral blood blood
21 chr10:116162800-116164800 Flanking Bivalent TSS/Enh Ganglion Eminence derived primary cultured neurospheres brain
22 chr10:116162800-116164800 Active TSS Ovary ovary
23 chr10:116162800-116164800 Active TSS Right Atrium heart
24 chr10:116162800-116164800 Active TSS NHEK skin
25 chr10:116162800-116165000 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr10:116162800-116165000 Active TSS Esophagus oesophagus
27 chr10:116162800-116165200 Active TSS ES-WA7 Cell Line embryonic stem cell
28 chr10:116162800-116165200 Bivalent/Poised TSS Brain Inferior Temporal Lobe brain
29 chr10:116163000-116164400 Flanking Bivalent TSS/Enh H9 Derived Neuron Cultured Cells ES cell derived
30 chr10:116163000-116164600 Bivalent Enhancer Primary T helper cells PMA-I stimulated --
31 chr10:116163000-116164800 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells short term culture blood
32 chr10:116163000-116164800 Flanking Bivalent TSS/Enh Cortex derived primary cultured neurospheres brain
33 chr10:116163000-116164800 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin03 Skin
34 chr10:116163000-116164800 Active TSS Pancreatic Islets Pancreatic Islet
35 chr10:116163000-116165000 Bivalent/Poised TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
36 chr10:116163000-116165000 Flanking Active TSS Primary hematopoietic stem cells blood
37 chr10:116163000-116165000 Bivalent/Poised TSS Thymus Thymus
38 chr10:116163200-116164400 Enhancers Primary B cells from cord blood blood
39 chr10:116163200-116164600 Bivalent/Poised TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr10:116163200-116164600 Flanking Active TSS Lung lung
41 chr10:116163200-116164800 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
42 chr10:116163200-116164800 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
43 chr10:116163200-116164800 Active TSS A549 lung
44 chr10:116163200-116165000 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr10:116163200-116165000 Active TSS Small Intestine intestine
46 chr10:116163200-116165200 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
47 chr10:116163200-116165400 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
48 chr10:116163400-116164400 Flanking Bivalent TSS/Enh iPS DF 19.11 Cell Line embryonic stem cell
49 chr10:116163400-116164600 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr10:116163400-116164600 Bivalent/Poised TSS Fetal Intestine Small intestine

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