Variant report

Variant	rs551736726
Chromosome Location	chr9:98557497-98557498
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv893598	chr9:98508628-98645674	Weak transcription Active TSS Enhancers ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	46 gene(s)	inside rSNPs	diseases
2	nsv482884	chr9:98530027-98691937	Weak transcription ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Strong transcription Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
3	nsv893599	chr9:98542410-98991254	Bivalent Enhancer Enhancers Strong transcription Weak transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	52 gene(s)	inside rSNPs	diseases
4	nsv524001	chr9:98556894-98558844	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:98548200-98558400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr9:98548400-98578400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr9:98555400-98557600	Enhancers	HUVEC	blood vessel
4	chr9:98555400-98557600	Enhancers	NHDF-Ad	bronchial
5	chr9:98555800-98557600	Enhancers	Muscle Satellite Cultured Cells	--
6	chr9:98555800-98557600	Enhancers	HSMMtube	muscle
7	chr9:98555800-98557600	Enhancers	NHLF	lung
8	chr9:98556000-98557600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr9:98556000-98557600	Enhancers	Osteobl	bone
10	chr9:98556200-98557600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr9:98556200-98557600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr9:98556400-98557600	Enhancers	NH-A	brain
13	chr9:98556800-98557600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr9:98557000-98557800	Enhancers	Fetal Muscle Leg	muscle
15	chr9:98557200-98557600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
16	chr9:98557200-98557600	Enhancers	Ovary	ovary
17	chr9:98557400-98563600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
18	chr9:98557400-98577200	Weak transcription	Pancreas	Pancrea

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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