Variant report

Variant rs552448
Chromosome Location chr18:8085047-8085048
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:8052600-8105200 Weak transcription Skeletal Muscle Male skeletal muscle
2 chr18:8065600-8101600 Weak transcription Aorta Aorta
3 chr18:8066200-8094000 Weak transcription Hela-S3 cervix
4 chr18:8067000-8085800 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr18:8067400-8110200 Weak transcription Right Ventricle heart
6 chr18:8067600-8094800 Weak transcription NHDF-Ad bronchial
7 chr18:8068000-8085800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr18:8068000-8092400 Weak transcription Thymus Thymus
9 chr18:8068000-8094800 Weak transcription Primary T cells fromperipheralblood blood
10 chr18:8068000-8100000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr18:8068400-8095200 Weak transcription Lung lung
12 chr18:8068400-8101600 Weak transcription Fetal Stomach stomach
13 chr18:8068400-8102400 Weak transcription Fetal Thymus thymus
14 chr18:8068600-8124800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr18:8069000-8087600 Weak transcription Primary hematopoietic stem cells short term culture blood
16 chr18:8069000-8102200 Weak transcription Fetal Muscle Leg muscle
17 chr18:8069000-8102400 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr18:8069000-8102400 Weak transcription Stomach Smooth Muscle stomach
19 chr18:8069400-8103400 Weak transcription Fetal Muscle Trunk muscle
20 chr18:8069600-8088400 Weak transcription HMEC breast
21 chr18:8069600-8102400 Weak transcription Brain Anterior Caudate brain
22 chr18:8070000-8085800 Weak transcription Brain Substantia Nigra brain
23 chr18:8070000-8085800 Weak transcription A549 lung
24 chr18:8070000-8093200 Weak transcription Fetal Lung lung
25 chr18:8070000-8097600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr18:8070200-8085400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr18:8074200-8102400 Weak transcription Psoas Muscle Psoas
28 chr18:8076400-8087600 Weak transcription Fetal Adrenal Gland Adrenal Gland
29 chr18:8078600-8085400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr18:8079000-8085400 Weak transcription Left Ventricle heart
31 chr18:8079000-8092600 Weak transcription Ovary ovary
32 chr18:8079200-8085600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr18:8079200-8085600 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr18:8079200-8085800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr18:8079400-8085600 Weak transcription Adipose Nuclei Adipose
36 chr18:8079400-8085800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr18:8080600-8091000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr18:8082200-8092600 Weak transcription Gastric stomach
39 chr18:8083000-8085400 Enhancers ES-I3 Cell Line embryonic stem cell
40 chr18:8083600-8086000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
41 chr18:8084200-8085200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
42 chr18:8084200-8085200 Enhancers Osteobl bone
43 chr18:8084400-8085200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr18:8084400-8085200 Enhancers Muscle Satellite Cultured Cells --
45 chr18:8084400-8085400 Enhancers HUES48 Cell Line embryonic stem cell
46 chr18:8084400-8085400 Enhancers HUES6 Cell Line embryonic stem cell
47 chr18:8084400-8085600 Enhancers HSMM muscle
48 chr18:8084400-8102800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr18:8084600-8085400 Enhancers iPS-18 Cell Line embryonic stem cell
50 chr18:8084600-8086400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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