Variant report

Variant	rs555111436
Chromosome Location	chr4:167004236-167004237
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:14 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv821638	chr4:166837633-167262625	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv830142	chr4:166935555-167095922	Strong transcription Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv1034421	chr4:166961339-167893289	Enhancers ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
4	nsv537339	chr4:166961339-167893289	Weak transcription Enhancers Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
5	esv3323263	chr4:167002302-167006800	Weak transcription Strong transcription	n/a	n/a	inside rSNPs	diseases
6	nsv513176	chr4:167002722-167005568	Weak transcription Strong transcription	n/a	n/a	inside rSNPs	diseases
7	esv3510223	chr4:167003577-167005950	Weak transcription	n/a	n/a	inside rSNPs	diseases
8	esv3466587	chr4:167004102-167005450	Weak transcription	n/a	n/a	inside rSNPs	diseases
9	esv7036	chr4:167004137-167005158	Weak transcription	n/a	n/a	inside rSNPs	diseases
10	esv3466588	chr4:167004186-167005024	Weak transcription	n/a	n/a	inside rSNPs	diseases
11	esv3510225	chr4:167004216-167005044	Weak transcription	n/a	n/a	inside rSNPs	diseases
12	esv3466591	chr4:167004223-167004990	Weak transcription	n/a	n/a	inside rSNPs	diseases
13	esv3380125	chr4:167004224-167005001	Weak transcription	n/a	n/a	inside rSNPs	diseases
14	esv3510226	chr4:167004227-167004961	Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:166987000-167004800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr4:167003400-167007600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links