Variant report

Variant	rs556009744
Chromosome Location	chr20:15435421-15435422
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:14 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1062252	chr20:14964258-15547739	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv544206	chr20:14964258-15547739	Enhancers ZNF genes & repeats Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
3	nsv869328	chr20:15325423-16213898	Flanking Active TSS Enhancers ZNF genes & repeats Weak transcription Bivalent Enhancer Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
4	nsv833927	chr20:15362602-15520185	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	esv3424538	chr20:15435181-15435592	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv3489480	chr20:15435199-15435575	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv3454139	chr20:15435224-15435550	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv3454138	chr20:15435228-15435545	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
9	esv3454137	chr20:15435240-15435504	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
10	esv2836	chr20:15435268-15435579	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
11	nsv179072	chr20:15435302-15435465	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
12	esv3454140	chr20:15435302-15435477	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
13	esv3489481	chr20:15435302-15435477	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
14	esv3454899	chr20:15435347-15436804	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:15434600-15435800	Enhancers	Fetal Kidney	kidney
2	chr20:15435400-15437400	Enhancers	Primary monocytes fromperipheralblood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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