Variant report

Variant	rs556263186
Chromosome Location	chr11:83686476-83686477
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898025	chr11:83658909-83796678	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
2	nsv1039924	chr11:83662904-83993497	Enhancers Active TSS Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	nsv541102	chr11:83662904-83993497	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
4	nsv898026	chr11:83685801-83789540	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83682800-83687000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
2	chr11:83682800-83687200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr11:83683800-83692000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
4	chr11:83684000-83686800	Weak transcription	Cortex derived primary cultured neurospheres	brain
5	chr11:83684000-83687000	Weak transcription	Brain Angular Gyrus	brain
6	chr11:83684000-83687000	Weak transcription	Brain Anterior Caudate	brain
7	chr11:83684000-83687000	Weak transcription	Brain Cingulate Gyrus	brain
8	chr11:83684000-83687000	Weak transcription	Brain Inferior Temporal Lobe	brain
9	chr11:83684000-83687200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
10	chr11:83684000-83690400	Weak transcription	Brain Hippocampus Middle	brain
11	chr11:83684000-83690600	Weak transcription	Brain Substantia Nigra	brain
12	chr11:83686400-83688600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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