Variant report

Variant rs55653339
Chromosome Location chr18:43863383-43863384
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:43841000-43864200 Weak transcription Brain Cingulate Gyrus brain
2 chr18:43842200-43869800 Weak transcription Stomach Smooth Muscle stomach
3 chr18:43845600-43863600 Weak transcription Brain Anterior Caudate brain
4 chr18:43852200-43879000 Weak transcription Primary T cells fromperipheralblood blood
5 chr18:43853000-43877800 Weak transcription Primary T cells from cord blood blood
6 chr18:43857000-43877800 Weak transcription Aorta Aorta
7 chr18:43859000-43863400 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr18:43859200-43869400 Weak transcription Left Ventricle heart
9 chr18:43860400-43873000 Weak transcription Fetal Heart heart
10 chr18:43861400-43863800 Enhancers K562 blood
11 chr18:43861400-43864400 Enhancers Skeletal Muscle Male skeletal muscle
12 chr18:43861400-43864400 Enhancers Skeletal Muscle Female skeletal muscle
13 chr18:43861400-43864600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr18:43861400-43864600 Enhancers Hela-S3 cervix
15 chr18:43861800-43863400 Weak transcription HUES6 Cell Line embryonic stem cell
16 chr18:43861800-43864800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr18:43862000-43863600 Weak transcription Esophagus oesophagus
18 chr18:43862400-43870200 Weak transcription Liver Liver
19 chr18:43862600-43863400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr18:43862600-43864400 Enhancers Fetal Muscle Leg muscle
21 chr18:43862800-43864400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
22 chr18:43863000-43863400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
23 chr18:43863000-43863800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr18:43863000-43863800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
25 chr18:43863000-43863800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr18:43863000-43863800 Enhancers Placenta Amnion Placenta Amnion
27 chr18:43863000-43864200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr18:43863000-43864200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr18:43863000-43864200 Enhancers Psoas Muscle Psoas
30 chr18:43863000-43864400 Enhancers iPS-20b Cell Line embryonic stem cell
31 chr18:43863000-43864400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
32 chr18:43863000-43864400 Enhancers Fetal Muscle Trunk muscle
33 chr18:43863000-43864600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr18:43863200-43863600 Enhancers Spleen Spleen
35 chr18:43863200-43864000 Enhancers HUES48 Cell Line embryonic stem cell
36 chr18:43863200-43864000 Enhancers Fetal Intestine Small intestine
37 chr18:43863200-43864200 Enhancers iPS-15b Cell Line embryonic stem cell
38 chr18:43863200-43864400 Enhancers ES-I3 Cell Line embryonic stem cell
39 chr18:43863200-43864400 Enhancers H1 Cell Line embryonic stem cell
40 chr18:43863200-43864400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr18:43863200-43864400 Enhancers HUES64 Cell Line embryonic stem cell
42 chr18:43863200-43864400 Enhancers iPS-18 Cell Line embryonic stem cell
43 chr18:43863200-43864600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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