Variant report

Variant	rs556677048
Chromosome Location	chr1:223567586-223567587
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832670	chr1:223561771-223683381	Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Bivalent/Poised TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	nsv4687	chr1:223565080-223610362	Bivalent Enhancer Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
3	nsv517708	chr1:223567267-223567803	Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:223566600-223567600	Flanking Bivalent TSS/Enh	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr1:223566800-223567600	Bivalent/Poised TSS	Primary hematopoietic stem cells	blood
3	chr1:223566800-223568600	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr1:223567000-223567600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
5	chr1:223567200-223567600	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
6	chr1:223567200-223567600	Bivalent Enhancer	Right Ventricle	heart
7	chr1:223567200-223567600	Flanking Bivalent TSS/Enh	NHEK	skin
8	chr1:223567200-223568000	ZNF genes & repeats	Lung	lung
9	chr1:223567400-223567600	Bivalent Enhancer	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr1:223567400-223567800	Bivalent Enhancer	H1 Derived Mesenchymal Stem Cells	ES cell derived
11	chr1:223567400-223567800	Enhancers	Esophagus	oesophagus
12	chr1:223567400-223568000	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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