No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs190004318 |
chr1:223565104-223565105 |
Weak transcription
|
CpG islandChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs575662091 |
chr1:223565180-223565181 |
Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs551715957 |
chr1:223565186-223565187 |
Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs75547790 |
chr1:223565191-223565192 |
Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs564239798 |
chr1:223565195-223565196 |
Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs532218490 |
chr1:223565302-223565303 |
Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs540789246 |
chr1:223565320-223565321 |
Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs116741615 |
chr1:223565323-223565324 |
Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs529972596 |
chr1:223565324-223565325 |
Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs529271686 |
chr1:223565357-223565358 |
Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs547894193 |
chr1:223565364-223565365 |
Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs569668090 |
chr1:223565378-223565379 |
Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs149091195 |
chr1:223565422-223565423 |
Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs571955216 |
chr1:223565425-223565426 |
Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs574757734 |
chr1:223565448-223565449 |
Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs542011035 |
chr1:223565489-223565490 |
Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs374217514 |
chr1:223565490-223565491 |
Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs534514128 |
chr1:223565567-223565568 |
Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs570552899 |
chr1:223565601-223565602 |
Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs78180684 |
chr1:223565623-223565624 |
Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs6701453 |
chr1:223565676-223565677 |
Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
22 |
rs143271494 |
chr1:223565773-223565774 |
Weak transcription
|
CpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs536109699 |
chr1:223565774-223565775 |
Weak transcription
|
CpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs557354087 |
chr1:223565813-223565814 |
Weak transcription Enhancers
|
CpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs575642695 |
chr1:223565815-223565816 |
Weak transcription Enhancers
|
CpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs186197273 |
chr1:223565857-223565858 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
27 |
rs545784911 |
chr1:223565884-223565885 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
28 |
rs76716587 |
chr1:223565997-223565998 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
29 |
rs190728688 |
chr1:223566017-223566018 |
Weak transcription Bivalent/Poised TSS Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
30 |
rs558618569 |
chr1:223566058-223566059 |
Weak transcription Bivalent/Poised TSS Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
31 |
rs74835296 |
chr1:223566072-223566073 |
Weak transcription Bivalent/Poised TSS Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
32 |
rs181496859 |
chr1:223566092-223566093 |
Weak transcription Bivalent/Poised TSS Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
33 |
rs148327270 |
chr1:223566111-223566112 |
Weak transcription Bivalent/Poised TSS Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
34 |
rs141492179 |
chr1:223566121-223566122 |
Weak transcription Bivalent/Poised TSS Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
35 |
rs186469141 |
chr1:223566169-223566170 |
Weak transcription Bivalent/Poised TSS Bivalent Enhancer
|
CpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs191801977 |
chr1:223566183-223566184 |
Weak transcription Bivalent/Poised TSS Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
37 |
rs147034681 |
chr1:223566205-223566206 |
Weak transcription Enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
38 |
rs563431443 |
chr1:223566290-223566291 |
Weak transcription Enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs530560752 |
chr1:223566303-223566304 |
Weak transcription Enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs183052453 |
chr1:223566352-223566353 |
Weak transcription Enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs570563035 |
chr1:223566370-223566371 |
Weak transcription Enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs369483663 |
chr1:223566379-223566380 |
Weak transcription Enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs528163297 |
chr1:223566380-223566381 |
Weak transcription Enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs371333255 |
chr1:223566468-223566469 |
Weak transcription Enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer
|
CpG islandChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs115995867 |
chr1:223566494-223566495 |
Weak transcription Enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer
|
CpG islandChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs2678371 |
chr1:223566508-223566509 |
Weak transcription Enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs576874104 |
chr1:223566535-223566536 |
Weak transcription Enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs535670835 |
chr1:223566661-223566662 |
Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Active TSS Bivalent Enhancer ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs557678563 |
chr1:223566670-223566671 |
Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Active TSS Bivalent Enhancer ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs569169878 |
chr1:223566690-223566691 |
Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Active TSS Bivalent Enhancer ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|