The 2.0 version of rSNPBase

Variant report

Variant rs55671025
Chromosome Location chr12:57681980-57681981
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:57654800-57705400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr12:57656600-57682800 Weak transcription Fetal Brain Male brain
3 chr12:57662800-57706000 Strong transcription Primary monocytes fromperipheralblood blood
4 chr12:57667600-57685600 Weak transcription Fetal Heart heart
5 chr12:57667600-57687200 Weak transcription Psoas Muscle Psoas
6 chr12:57670400-57707000 Strong transcription Monocytes-CD14+_RO01746 blood
7 chr12:57670600-57693000 Strong transcription Fetal Muscle Leg muscle
8 chr12:57670600-57694400 Strong transcription Breast Myoepithelial Primary Cells Breast
9 chr12:57670600-57698600 Strong transcription Primary neutrophils fromperipheralblood blood
10 chr12:57670600-57700000 Strong transcription Fetal Muscle Trunk muscle
11 chr12:57671000-57694400 Strong transcription Adipose Nuclei Adipose
12 chr12:57671000-57700000 Strong transcription Liver Liver
13 chr12:57671200-57690400 Strong transcription Fetal Brain Female brain
14 chr12:57671600-57692200 Strong transcription Skeletal Muscle Female skeletal muscle
15 chr12:57672200-57688400 Weak transcription Small Intestine intestine
16 chr12:57672800-57688400 Weak transcription Colonic Mucosa Colon
17 chr12:57674200-57682800 Weak transcription Brain Cingulate Gyrus brain
18 chr12:57674400-57684600 Weak transcription iPS-20b Cell Line embryonic stem cell
19 chr12:57674400-57697000 Strong transcription Placenta Placenta
20 chr12:57674600-57682600 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr12:57674600-57683200 Weak transcription Right Ventricle heart
22 chr12:57674600-57685000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr12:57674600-57686800 Weak transcription Esophagus oesophagus
24 chr12:57674600-57693200 Weak transcription iPS-15b Cell Line embryonic stem cell
25 chr12:57674600-57693600 Weak transcription H9 Cell Line embryonic stem cell
26 chr12:57674600-57694200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
27 chr12:57674600-57697000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
28 chr12:57674600-57700000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr12:57674600-57702600 Weak transcription HUVEC blood vessel
30 chr12:57674600-57704400 Strong transcription Primary T regulatory cells fromperipheralblood blood
31 chr12:57674800-57682400 Strong transcription Primary hematopoietic stem cells blood
32 chr12:57674800-57682800 Weak transcription HSMMtube muscle
33 chr12:57674800-57685600 Weak transcription Primary T killer memory cells from peripheral blood blood
34 chr12:57674800-57688400 Weak transcription NHDF-Ad bronchial
35 chr12:57674800-57688800 Weak transcription HMEC breast
36 chr12:57674800-57691200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
37 chr12:57674800-57693600 Weak transcription ES-I3 Cell Line embryonic stem cell
38 chr12:57674800-57694200 Weak transcription Pancreatic Islets Pancreatic Islet
39 chr12:57674800-57697400 Strong transcription Fetal Adrenal Gland Adrenal Gland
40 chr12:57674800-57697800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr12:57674800-57700000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
42 chr12:57674800-57701000 Strong transcription Primary T cells from cord blood blood
43 chr12:57675000-57683400 Weak transcription HepG2 liver
44 chr12:57675000-57690000 Weak transcription H1 Cell Line embryonic stem cell
45 chr12:57675000-57698400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr12:57675000-57699400 Weak transcription Primary T helper naive cells from peripheral blood blood
47 chr12:57675000-57700000 Strong transcription Fetal Thymus thymus
48 chr12:57675000-57701000 Strong transcription Primary T cells fromperipheralblood blood
49 chr12:57675200-57682600 Weak transcription NH-A brain
50 chr12:57675400-57707000 Strong transcription Primary T helper cells fromperipheralblood blood

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Last update: Aug 31, 2015