Variant report

Variant rs55674533
Chromosome Location chr6:26252741-26252742
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:26249200-26254000 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr6:26249200-26254200 Active TSS ES-I3 Cell Line embryonic stem cell
3 chr6:26249200-26254600 Active TSS H1 Cell Line embryonic stem cell
4 chr6:26249400-26253000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
5 chr6:26249400-26253200 Active TSS Fetal Lung lung
6 chr6:26249400-26253400 Active TSS Primary T helper naive cells from peripheral blood blood
7 chr6:26249400-26253400 Active TSS K562 blood
8 chr6:26249400-26254000 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr6:26249400-26254000 Active TSS Fetal Kidney kidney
10 chr6:26249400-26254200 Active TSS H9 Cell Line embryonic stem cell
11 chr6:26249400-26254200 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr6:26249400-26254200 Active TSS iPS-15b Cell Line embryonic stem cell
13 chr6:26249400-26254200 Active TSS iPS-18 Cell Line embryonic stem cell
14 chr6:26249400-26254200 Active TSS iPS-20b Cell Line embryonic stem cell
15 chr6:26249400-26254200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
16 chr6:26249600-26253400 Active TSS Fetal Brain Female brain
17 chr6:26249600-26253600 Active TSS Duodenum Mucosa Duodenum
18 chr6:26249600-26253800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr6:26249600-26253800 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
20 chr6:26249600-26254000 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
21 chr6:26249600-26254000 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
22 chr6:26249600-26254000 Active TSS Rectal Mucosa Donor 29 rectum
23 chr6:26249600-26254000 Active TSS GM12878-XiMat blood
24 chr6:26249600-26254200 Active TSS HUES48 Cell Line embryonic stem cell
25 chr6:26249600-26254200 Active TSS HUES64 Cell Line embryonic stem cell
26 chr6:26249600-26254200 Active TSS ES-UCSF4 Cell Line embryonic stem cell
27 chr6:26249600-26254200 Active TSS Fetal Stomach stomach
28 chr6:26249600-26254200 Active TSS NHLF lung
29 chr6:26249600-26254800 Active TSS Thymus Thymus
30 chr6:26249600-26255400 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr6:26249800-26252800 Active TSS Primary T helper memory cells from peripheral blood 2 blood
32 chr6:26249800-26253000 Active TSS Primary B cells from peripheral blood blood
33 chr6:26249800-26253000 Active TSS Primary T killer naive cells fromperipheralblood blood
34 chr6:26249800-26253000 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
35 chr6:26249800-26253200 Active TSS Primary T helper naive cells fromperipheralblood blood
36 chr6:26249800-26253400 Active TSS Primary T killer memory cells from peripheral blood blood
37 chr6:26249800-26253800 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
38 chr6:26249800-26254000 Active TSS ES-WA7 Cell Line embryonic stem cell
39 chr6:26249800-26254200 Active TSS HUES6 Cell Line embryonic stem cell
40 chr6:26249800-26254800 Active TSS Fetal Intestine Large intestine
41 chr6:26249800-26255000 Active TSS Fetal Intestine Small intestine
42 chr6:26250000-26253400 Active TSS Cortex derived primary cultured neurospheres brain
43 chr6:26250000-26254200 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr6:26250200-26253000 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
45 chr6:26250200-26253600 Active TSS Hela-S3 cervix
46 chr6:26250400-26253800 Bivalent/Poised TSS NHDF-Ad bronchial
47 chr6:26250400-26254000 Flanking Active TSS Primary hematopoietic stem cells blood
48 chr6:26250600-26253800 Active TSS Colonic Mucosa Colon
49 chr6:26250600-26254200 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
50 chr6:26250800-26253000 Active TSS Fetal Brain Male brain

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