Variant report

Variant rs55719906
Chromosome Location chr1:56611445-56611446
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:22 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:56603000-56612000 Weak transcription Psoas Muscle Psoas
2 chr1:56604400-56613600 Weak transcription HUVEC blood vessel
3 chr1:56605800-56622600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr1:56606400-56611600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
5 chr1:56610400-56612200 Weak transcription Fetal Muscle Leg muscle
6 chr1:56610600-56612200 Enhancers Primary T cells from cord blood blood
7 chr1:56610800-56612000 Weak transcription Aorta Aorta
8 chr1:56610800-56613600 Weak transcription Fetal Intestine Small intestine
9 chr1:56611000-56612600 Enhancers Thymus Thymus
10 chr1:56611000-56612800 Enhancers Fetal Thymus thymus
11 chr1:56611000-56613600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr1:56611200-56611800 Enhancers Dnd41 blood
13 chr1:56611200-56612800 Weak transcription Fetal Intestine Large intestine
14 chr1:56611200-56617600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr1:56611400-56611600 Enhancers Ovary ovary
16 chr1:56611400-56611800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
17 chr1:56611400-56612600 Enhancers Colon Smooth Muscle Colon
18 chr1:56611400-56612600 Enhancers Skeletal Muscle Male skeletal muscle
19 chr1:56611400-56613000 Enhancers Adipose Nuclei Adipose
20 chr1:56611400-56613600 Enhancers Fetal Kidney kidney
21 chr1:56611400-56613600 Enhancers NHDF-Ad bronchial
22 chr1:56611400-56613800 Enhancers Fetal Stomach stomach

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