Variant report

Variant rs55722812
Chromosome Location chr16:75572089-75572090
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:75551200-75589200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr16:75551400-75572200 Weak transcription Cortex derived primary cultured neurospheres brain
3 chr16:75551400-75584000 Weak transcription Right Atrium heart
4 chr16:75551600-75575800 Weak transcription Brain Hippocampus Middle brain
5 chr16:75551800-75572400 Weak transcription Right Ventricle heart
6 chr16:75551800-75578000 Weak transcription Fetal Brain Female brain
7 chr16:75557800-75572400 Weak transcription Brain Cingulate Gyrus brain
8 chr16:75561400-75578000 Weak transcription Stomach Smooth Muscle stomach
9 chr16:75561800-75579400 Weak transcription Gastric stomach
10 chr16:75563200-75575200 Weak transcription Brain Angular Gyrus brain
11 chr16:75564000-75573800 Weak transcription Ovary ovary
12 chr16:75564000-75578000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr16:75564200-75572400 Weak transcription Brain Germinal Matrix brain
14 chr16:75564200-75572600 Weak transcription Brain Inferior Temporal Lobe brain
15 chr16:75564200-75589200 Weak transcription Lung lung
16 chr16:75564800-75575200 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr16:75567000-75572400 Weak transcription Brain Anterior Caudate brain
18 chr16:75569000-75583800 Weak transcription GM12878-XiMat blood
19 chr16:75569200-75588600 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr16:75569400-75584000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr16:75569400-75588400 Weak transcription Osteobl bone
22 chr16:75569600-75578000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr16:75570000-75573800 Weak transcription Fetal Stomach stomach
24 chr16:75570000-75574000 Weak transcription Small Intestine intestine
25 chr16:75570000-75578200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr16:75570000-75584000 Weak transcription HUES6 Cell Line embryonic stem cell
27 chr16:75570000-75588600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr16:75570000-75588800 Weak transcription Rectal Smooth Muscle rectum
29 chr16:75570400-75575000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr16:75570400-75583800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
31 chr16:75570600-75572400 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr16:75570600-75573200 Enhancers Rectal Mucosa Donor 31 rectum
33 chr16:75570600-75573400 Enhancers Duodenum Mucosa Duodenum
34 chr16:75570600-75574200 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr16:75570600-75588600 Weak transcription NHEK skin
36 chr16:75570600-75588800 Weak transcription Fetal Adrenal Gland Adrenal Gland
37 chr16:75570600-75589000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
38 chr16:75570800-75572400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr16:75570800-75578000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr16:75571200-75573000 Enhancers Fetal Intestine Small intestine
41 chr16:75571200-75573200 Enhancers Fetal Intestine Large intestine
42 chr16:75571200-75577800 Weak transcription Adipose Nuclei Adipose
43 chr16:75571200-75578200 Weak transcription HSMMtube muscle
44 chr16:75571600-75575600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr16:75571800-75584000 Weak transcription Spleen Spleen
46 chr16:75571800-75588600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr16:75572000-75572600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr16:75572000-75572800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
49 chr16:75572000-75572800 Enhancers Colonic Mucosa Colon
50 chr16:75572000-75575600 Weak transcription Hela-S3 cervix

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