Variant report

Variant	rs60704421
Chromosome Location	chr16:75551404-75551405
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CHD2	chr16:75551010-75551575	Hela-S3	cervix:	n/a	n/a
2	CEBPB	chr16:75551132-75551669	K562	blood:	n/a	n/a
3	TCF12	chr16:75551333-75551547	H1-hESC	embryonic stem cell:	n/a	n/a
4	EP300	chr16:75551014-75551441	GM12878	blood:	n/a	chr16:75551306-75551322
5	CUX1	chr16:75551210-75551594	K562	blood:	n/a	n/a
6	CTCF	chr16:75551360-75551510	GM12875	blood:	n/a	chr16:75551447-75551465 chr16:75551448-75551464 chr16:75551402-75551415
7	UBTF	chr16:75550449-75551549	K562	blood:	n/a	n/a
8	RFX5	chr16:75550946-75551584	Hela-S3	cervix:	n/a	n/a
9	MAX	chr16:75550855-75551587	ECC-1	luminal epithelium:	n/a	n/a
10	CTCF	chr16:75551216-75551599	H1-hESC	embryonic stem cell:	n/a	chr16:75551447-75551465 chr16:75551303-75551316 chr16:75551448-75551464 chr16:75551402-75551415 chr16:75551307-75551320
11	JUND	chr16:75551076-75551614	H1-hESC	embryonic stem cell:	n/a	n/a
12	TBL1XR1	chr16:75551026-75551647	K562	blood:	n/a	n/a
13	CTCF	chr16:75551340-75551490	GM12874	blood:	n/a	chr16:75551447-75551465 chr16:75551448-75551464 chr16:75551402-75551415
14	SMC3	chr16:75550441-75551664	Hela-S3	cervix:	n/a	chr16:75551402-75551412 chr16:75551200-75551207
15	CEBPB	chr16:75551157-75551546	IMR90	lung:	n/a	n/a
16	MAZ	chr16:75551013-75551601	HepG2	liver:	n/a	n/a
17	POLR2A	chr16:75550435-75551448	A549	lung:	n/a	n/a
18	CBX3	chr16:75551286-75551594	K562	blood:	n/a	n/a
19	CTCF	chr16:75551299-75551614	GM19238	blood:	n/a	chr16:75551447-75551465 chr16:75551303-75551316 chr16:75551448-75551464 chr16:75551402-75551415 chr16:75551307-75551320
20	CTCF	chr16:75551400-75551550	Hela-S3	cervix:	n/a	chr16:75551447-75551465 chr16:75551448-75551464 chr16:75551402-75551415
21	ETS1	chr16:75550838-75551683	K562	blood:	n/a	chr16:75551313-75551324 chr16:75550981-75550995 chr16:75550982-75550993 chr16:75550982-75550989
22	JUN	chr16:75551287-75551545	H1-hESC	embryonic stem cell:	n/a	n/a
23	ARID3A	chr16:75551044-75551602	K562	blood:	n/a	n/a
24	CTCF	chr16:75551305-75551613	Gliobla	brain:	n/a	chr16:75551447-75551465 chr16:75551448-75551464 chr16:75551402-75551415 chr16:75551307-75551320
25	POLR2A	chr16:75550060-75551542	K562	blood:	n/a	n/a
26	CEBPB	chr16:75551233-75551462	K562	blood:	n/a	n/a
27	CTCF	chr16:75551340-75551490	GM12870	blood:	n/a	chr16:75551447-75551465 chr16:75551448-75551464 chr16:75551402-75551415
28	POLR2A	chr16:75550780-75551498	PFSK-1	brain:	n/a	n/a
29	CEBPB	chr16:75551207-75551516	ECC-1	luminal epithelium:	n/a	n/a
30	CTCF	chr16:75551291-75551590	A549	lung:	n/a	chr16:75551447-75551465 chr16:75551303-75551316 chr16:75551448-75551464 chr16:75551402-75551415 chr16:75551307-75551320
31	ZC3H11A	chr16:75550925-75551618	K562	blood:	n/a	n/a
32	USF1	chr16:75551102-75551455	ECC-1	luminal epithelium:	n/a	chr16:75551106-75551122 chr16:75551188-75551204 chr16:75551304-75551320 chr16:75551268-75551279
33	MYC	chr16:75551162-75551480	MCF-7	breast:	n/a	n/a
34	RAD21	chr16:75551239-75551629	GM12878	blood:	n/a	n/a
35	RAD21	chr16:75550837-75551823	HCT-116	colon:	n/a	chr16:75551188-75551201
36	SIN3AK20	chr16:75551064-75551592	SK-N-SH	brain:	n/a	n/a
37	CEBPB	chr16:75551152-75551590	HepG2	liver:	n/a	n/a
38	TEAD4	chr16:75550989-75551638	K562	blood:	n/a	n/a
39	CREB1	chr16:75551008-75551519	ECC-1	luminal epithelium:	n/a	n/a
40	POLR2A	chr16:75550991-75551418	K562	blood:	n/a	n/a
41	CEBPB	chr16:75551031-75551702	A549	lung:	n/a	n/a
42	GABPA	chr16:75550834-75551696	MCF-7	breast:	n/a	chr16:75551407-75551416
43	PBX3	chr16:75550901-75551664	SK-N-SH	brain:	n/a	n/a
44	USF1	chr16:75551044-75551582	SK-N-SH	brain:	n/a	chr16:75551106-75551122 chr16:75551188-75551204 chr16:75551304-75551320 chr16:75551268-75551279
45	RFX5	chr16:75551104-75551526	GM12878	blood:	n/a	n/a
46	CTCF	chr16:75551010-75551686	HCT-116	colon:	n/a	chr16:75551447-75551465 chr16:75551303-75551316 chr16:75551187-75551200 chr16:75551448-75551464 chr16:75551136-75551149 chr16:75551048-75551056 chr16:75551402-75551415 chr16:75551307-75551320
47	POLR2A	chr16:75550949-75551421	K562	blood:	n/a	n/a
48	ATF3	chr16:75551025-75551513	K562	blood:	n/a	chr16:75551099-75551107
49	ELF1	chr16:75550796-75551522	K562	blood:	n/a	chr16:75551108-75551120
50	HDAC2	chr16:75550900-75551559	HepG2	liver:	n/a	chr16:75551459-75551473

No.	Distal block	Cell Line	Cell type
1	chr16:75551190..75551731-chr16:75654745..75655449,2	K562	blood:
2	chr16:75466031..75468931-chr16:75549812..75551653,2	K562	blood:
3	chr16:75538570..75543222-chr16:75547718..75552328,5	MCF-7	breast:
4	chr16:75548080..75552218-chr16:75679936..75683385,4	K562	blood:
5	chr16:75550671..75551452-chr22:50247463..50248018,2	HCT-116	colon:
6	chr16:75549723..75552104-chr16:75587869..75590374,4	MCF-7	breast:
7	chr16:75466874..75467584-chr16:75551355..75551855,2	K562	blood:
8	chr16:75510774..75513332-chr16:75550628..75552832,2	MCF-7	breast:
9	chr16:75497002..75498653-chr16:75549372..75551463,2	K562	blood:
10	chr16:75505348..75506153-chr16:75551055..75551869,3	MCF-7	breast:
11	chr11:62608635..62609543-chr16:75550660..75551562,3	Hela-S3	cervix:
12	chr16:75525799..75526656-chr16:75550606..75551571,3	MCF-7	breast:
13	chr11:65271441..65272209-chr16:75551020..75551636,2	Hela-S3	cervix:
14	chr16:75550007..75552554-chr16:75597669..75600323,2	MCF-7	breast:
15	chr16:75497768..75499173-chr16:75550502..75551937,8	MCF-7	breast:
16	chr16:75549961..75554189-chr16:75589462..75592660,4	K562	blood:
17	chr16:75549848..75551982-chr16:75681662..75683251,3	MCF-7	breast:
18	chr16:75536938..75540823-chr16:75549516..75552807,4	MCF-7	breast:
19	chr16:75497752..75498618-chr16:75550411..75551452,5	Hela-S3	cervix:
20	chr16:75465566..75468619-chr16:75548282..75552307,4	MCF-7	breast:
21	chr16:75549952..75552218-chr16:75681885..75683701,2	K562	blood:
22	chr16:75549686..75552508-chr16:75588605..75590350,2	MCF-7	breast:
23	chr16:75296409..75300528-chr16:75549238..75552790,3	MCF-7	breast:
24	chr16:75550692..75551663-chrX:24073311..24074062,2	Hela-S3	cervix:
25	chr16:75498381..75499126-chr16:75550587..75551534,2	K562	blood:
26	chr16:75550675..75551536-chr2:122288289..122288930,2	Hela-S3	cervix:
27	chr16:75549910..75552098-chr16:75575318..75577076,2	MCF-7	breast:
28	chr16:75550796..75551693-chr7:5569576..5570412,2	Hela-S3	cervix:
29	chr16:75505622..75506307-chr16:75550967..75551855,3	K562	blood:
30	chr16:75505099..75506340-chr16:75550615..75551890,14	MCF-7	breast:
31	chr16:75537791..75540090-chr16:75550427..75552739,2	K562	blood:
32	chr16:75550465..75552637-chr16:75558863..75560839,2	K562	blood:
33	chr1:20834189..20834981-chr16:75550708..75551438,2	Hela-S3	cervix:
34	chr1:154155243..154155810-chr16:75550915..75551583,2	Hela-S3	cervix:

Variant related genes	Relation type
ENSG00000262583	TF binding region
ENSG00000205084	Chromatin interaction
ENSG00000264229	Chromatin interaction
ENSG00000261717	Chromatin interaction
ENSG00000074054	Chromatin interaction
ENSG00000065427	Chromatin interaction
ENSG00000034713	Chromatin interaction
ENSG00000262583	Chromatin interaction
ENSG00000143549	Chromatin interaction
ENSG00000166848	Chromatin interaction
ENSG00000133316	Chromatin interaction
ENSG00000153774	Chromatin interaction
ENSG00000100426	Chromatin interaction
ENSG00000166822	Chromatin interaction
ENSG00000090432	Chromatin interaction
ENSG00000050820	Chromatin interaction
ENSG00000075624	Chromatin interaction

Extended variants
information (count: 109 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:44)

rs_ID	r²[population]
rs11860163	0.87[AMR][1000 genomes]
rs11860309	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs455579	0.80[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs459211	0.87[AMR][1000 genomes]
rs55722812	1.00[AMR][1000 genomes]
rs56071952	0.84[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs56995694	0.87[AMR][1000 genomes]
rs57155217	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57543848	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57768222	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57829605	0.85[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs58669977	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs58986524	0.85[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs59034986	0.87[AMR][1000 genomes]
rs59575876	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60159223	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60407291	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60562747	0.85[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs60994854	0.87[AMR][1000 genomes]
rs6564263	0.87[AMR][1000 genomes]
rs6564264	1.00[AMR][1000 genomes]
rs7184132	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs7186203	0.87[AMR][1000 genomes]
rs7188429	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7189782	1.00[AMR][1000 genomes]
rs7189978	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs7192958	0.87[AMR][1000 genomes]
rs7194322	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7194632	0.84[AFR][1000 genomes]
rs7194947	0.87[AMR][1000 genomes]
rs7206077	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs73610885	0.84[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs73610887	0.84[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs73610898	0.85[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs73612804	0.85[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs73612809	0.85[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs73612811	0.85[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs73612838	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73612847	0.87[AMR][1000 genomes]
rs74027405	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs8048381	0.80[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs8051685	0.85[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs8054411	0.87[AMR][1000 genomes]
rs8062862	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:65 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916502	chr16:74845880-75732365	Enhancers Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	131 gene(s)	inside rSNPs	diseases
2	nsv931939	chr16:75261354-75765025	Weak transcription Bivalent/Poised TSS Strong transcription Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	104 gene(s)	inside rSNPs	diseases
3	nsv1065995	chr16:75373756-75626027	Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	65 gene(s)	inside rSNPs	diseases
4	nsv1063718	chr16:75395969-75608071	Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	64 gene(s)	inside rSNPs	diseases
5	esv2758432	chr16:75419614-75576971	Enhancers Weak transcription Genic enhancers Flanking Active TSS Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
6	esv2758657	chr16:75419614-75576971	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
7	nsv525955	chr16:75473332-75628345	Strong transcription Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	57 gene(s)	inside rSNPs	diseases
8	nsv457521	chr16:75487758-75603925	Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	57 gene(s)	inside rSNPs	diseases
9	nsv572979	chr16:75487758-75603925	Weak transcription Enhancers Flanking Active TSS Genic enhancers Bivalent Enhancer Strong transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	57 gene(s)	inside rSNPs	diseases
10	esv3313995	chr16:75512166-75566404	Weak transcription Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
11	esv3313996	chr16:75512166-75566404	Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers Active TSS Strong transcription Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
12	nsv532561	chr16:75519574-75636977	Enhancers Flanking Active TSS Strong transcription Weak transcription Bivalent/Poised TSS Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases
13	nsv572981	chr16:75521030-75581160	Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
14	nsv1059777	chr16:75522954-75572713	Bivalent/Poised TSS Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
15	nsv516675	chr16:75528511-75572012	Flanking Bivalent TSS/Enh Active TSS Enhancers Bivalent/Poised TSS Weak transcription Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
16	nsv906914	chr16:75528511-75573884	Strong transcription Enhancers Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
17	nsv906915	chr16:75528511-75574729	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
18	nsv906916	chr16:75528511-75579233	Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
19	nsv906917	chr16:75528511-75581160	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
20	esv3509911	chr16:75531267-75573060	Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
21	esv3509912	chr16:75531267-75573060	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
22	esv2647265	chr16:75532031-75573468	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
23	nsv906918	chr16:75532044-75573884	Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
24	nsv906919	chr16:75532044-75579233	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
25	esv3430822	chr16:75532230-75572596	Weak transcription Flanking Active TSS Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
26	esv3417877	chr16:75532542-75572654	Weak transcription Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
27	nsv1062535	chr16:75533659-75575997	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
28	nsv1065709	chr16:75533659-75583008	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	21 gene(s)	inside rSNPs	diseases
29	esv2763141	chr16:75533671-75575998	Flanking Active TSS Active TSS Enhancers Weak transcription Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
30	nsv1060637	chr16:75534278-75575997	Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
31	nsv1055697	chr16:75535360-75575997	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
32	nsv9461	chr16:75536123-75576182	Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Weak transcription Bivalent/Poised TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
33	nsv1057506	chr16:75536272-75575997	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
34	nsv827748	chr16:75538442-75580713	Enhancers Transcr. at gene 5' and 3' Weak transcription Active TSS Strong transcription Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	21 gene(s)	inside rSNPs	diseases
35	nsv870450	chr16:75538457-75591359	Enhancers Strong transcription Flanking Active TSS Active TSS Weak transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	41 gene(s)	inside rSNPs	diseases
36	esv3415643	chr16:75538811-75579509	Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	21 gene(s)	inside rSNPs	diseases
37	nsv827749	chr16:75539113-75579358	Active TSS Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	21 gene(s)	inside rSNPs	diseases
38	nsv827750	chr16:75539336-75579358	Enhancers Genic enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	21 gene(s)	inside rSNPs	diseases
39	nsv1056522	chr16:75539396-75575997	Enhancers Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
40	esv2762311	chr16:75539408-75575998	Strong transcription Active TSS Enhancers Flanking Active TSS Weak transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
41	esv2830028	chr16:75539436-75571923	Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
42	nsv906920	chr16:75539436-75573884	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
43	nsv572982	chr16:75539436-75574521	Flanking Active TSS Active TSS Enhancers Weak transcription Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
44	nsv572983	chr16:75539436-75575410	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
45	esv3693226	chr16:75539436-75575997	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
46	nsv572984	chr16:75539436-75579233	Active TSS Strong transcription Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
47	nsv906921	chr16:75539436-75579233	Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases
48	nsv906922	chr16:75539436-75580117	Active TSS Weak transcription Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	21 gene(s)	inside rSNPs	diseases
49	nsv572985	chr16:75539436-75581160	Active TSS Weak transcription Strong transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	21 gene(s)	inside rSNPs	diseases
50	nsv906923	chr16:75539436-75581160	Weak transcription Active TSS Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	21 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:82 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:75549800-75551600	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr16:75550000-75551600	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr16:75550000-75551600	Active TSS	Primary T regulatory cells fromperipheralblood	blood
4	chr16:75550000-75551800	Active TSS	Primary T cells from cord blood	blood
5	chr16:75550000-75551800	Active TSS	Rectal Mucosa Donor 29	rectum
6	chr16:75550000-75551800	Active TSS	NHLF	lung
7	chr16:75550200-75551600	Active TSS	Primary T helper cells PMA-I stimulated	--
8	chr16:75550200-75551600	Active TSS	Brain Angular Gyrus	brain
9	chr16:75550200-75551800	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
10	chr16:75550200-75551800	Active TSS	Brain Anterior Caudate	brain
11	chr16:75550200-75551800	Active TSS	Duodenum Smooth Muscle	Duodenum
12	chr16:75550200-75551800	Active TSS	Fetal Kidney	kidney
13	chr16:75550400-75551600	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr16:75550400-75551600	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
15	chr16:75550400-75551600	Active TSS	Primary T helper naive cells from peripheral blood	blood
16	chr16:75550400-75551600	Active TSS	Primary T helper naive cells fromperipheralblood	blood
17	chr16:75550400-75551600	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
18	chr16:75550400-75551600	Active TSS	Muscle Satellite Cultured Cells	--
19	chr16:75550400-75551600	Active TSS	Brain Hippocampus Middle	brain
20	chr16:75550400-75551600	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
21	chr16:75550400-75551600	Active TSS	Ovary	ovary
22	chr16:75550400-75551600	Active TSS	Rectal Smooth Muscle	rectum
23	chr16:75550400-75551600	Active TSS	GM12878-XiMat	blood
24	chr16:75550400-75551800	Active TSS	Brain Germinal Matrix	brain
25	chr16:75550400-75551800	Active TSS	Fetal Stomach	stomach
26	chr16:75550400-75551800	Active TSS	HepG2	liver
27	chr16:75550400-75551800	Active TSS	HSMM	muscle
28	chr16:75550600-75551600	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
29	chr16:75550600-75551600	Active TSS	Primary neutrophils fromperipheralblood	blood
30	chr16:75550600-75551600	Active TSS	Primary T helper cells fromperipheralblood	blood
31	chr16:75550600-75551600	Active TSS	Primary T killer memory cells from peripheral blood	blood
32	chr16:75550600-75551600	Active TSS	Primary mononuclear cells fromperipheralblood	Blood
33	chr16:75550600-75551600	Active TSS	Skeletal Muscle Male	skeletal muscle
34	chr16:75550600-75551600	Active TSS	Osteobl	bone
35	chr16:75550600-75551800	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
36	chr16:75550600-75551800	Active TSS	Adipose Nuclei	Adipose
37	chr16:75550600-75551800	Active TSS	Brain Cingulate Gyrus	brain
38	chr16:75550600-75551800	Active TSS	Fetal Brain Female	brain
39	chr16:75550800-75551600	Active TSS	Skeletal Muscle Female	skeletal muscle
40	chr16:75550800-75551600	Active TSS	Stomach Smooth Muscle	stomach
41	chr16:75550800-75551600	Active TSS	Dnd41	blood
42	chr16:75551000-75551600	Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
43	chr16:75551000-75551600	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
44	chr16:75551000-75551600	Active TSS	Thymus	Thymus
45	chr16:75551000-75551800	Active TSS	Colonic Mucosa	Colon
46	chr16:75551200-75551600	Active TSS	Primary hematopoietic stem cells short term culture	blood
47	chr16:75551200-75551600	Active TSS	Primary T helper 17 cells PMA-I stimulated	--
48	chr16:75551200-75551600	Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
49	chr16:75551200-75551600	Flanking Bivalent TSS/Enh	Fetal Thymus	thymus
50	chr16:75551200-75566400	Weak transcription	Brain Substantia Nigra	brain

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