The 2.0 version of rSNPBase

Variant report

Variant rs55747427
Chromosome Location chr12:121945315-121945316
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:121911400-121946400 Weak transcription Pancreas Pancrea
2 chr12:121924600-121946600 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr12:121926000-121946200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr12:121928600-121946400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr12:121928600-121965800 Weak transcription Hela-S3 cervix
6 chr12:121928800-121946000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr12:121928800-121946400 Weak transcription NHLF lung
8 chr12:121929000-121946200 Weak transcription Esophagus oesophagus
9 chr12:121929000-121946400 Weak transcription Placenta Placenta
10 chr12:121929200-121946400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr12:121929200-121954200 Weak transcription ES-WA7 Cell Line embryonic stem cell
12 chr12:121932000-121974400 Weak transcription NHEK skin
13 chr12:121934800-121968200 Weak transcription Small Intestine intestine
14 chr12:121935000-121946600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr12:121935000-121947200 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr12:121935000-121951800 Weak transcription Primary T killer memory cells from peripheral blood blood
17 chr12:121935200-121946400 Weak transcription Primary hematopoietic stem cells blood
18 chr12:121938200-121945800 Weak transcription Primary T helper cells PMA-I stimulated --
19 chr12:121938200-121946400 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr12:121938200-121949400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
21 chr12:121938200-121951800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr12:121938200-121968600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
23 chr12:121938200-121971000 Weak transcription Stomach Mucosa stomach
24 chr12:121938200-121973800 Weak transcription Placenta Amnion Placenta Amnion
25 chr12:121938400-121945800 Weak transcription Brain Inferior Temporal Lobe brain
26 chr12:121938400-121946000 Weak transcription Primary T helper naive cells fromperipheralblood blood
27 chr12:121938400-121946000 Weak transcription Left Ventricle heart
28 chr12:121938400-121946200 Weak transcription Primary B cells from cord blood blood
29 chr12:121938400-121946200 Weak transcription Adipose Nuclei Adipose
30 chr12:121938400-121946200 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr12:121938400-121946200 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr12:121938400-121946200 Weak transcription HepG2 liver
33 chr12:121938400-121946400 Weak transcription Muscle Satellite Cultured Cells --
34 chr12:121938400-121946400 Weak transcription Aorta Aorta
35 chr12:121938400-121946400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
36 chr12:121938400-121949400 Weak transcription HSMMtube muscle
37 chr12:121938400-121951600 Weak transcription A549 lung
38 chr12:121938400-121952400 Strong transcription Thymus Thymus
39 chr12:121938400-121957200 Weak transcription Fetal Lung lung
40 chr12:121938400-121968600 Weak transcription Fetal Kidney kidney
41 chr12:121938400-121973600 Weak transcription Psoas Muscle Psoas
42 chr12:121938600-121945400 Weak transcription Brain Hippocampus Middle brain
43 chr12:121938600-121946000 Weak transcription iPS-15b Cell Line embryonic stem cell
44 chr12:121938600-121946000 Weak transcription Colon Smooth Muscle Colon
45 chr12:121938600-121946400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
46 chr12:121938600-121946400 Weak transcription Brain Cingulate Gyrus brain
47 chr12:121938600-121946400 Weak transcription Rectal Smooth Muscle rectum
48 chr12:121938600-121946400 Weak transcription Right Ventricle heart
49 chr12:121938600-121952400 Strong transcription Fetal Stomach stomach
50 chr12:121938600-121959800 Weak transcription NH-A brain

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Last update: Aug 31, 2015