The 2.0 version of rSNPBase

Variant report

Variant rs55748551
Chromosome Location chr3:113043907-113043908
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:112996400-113046400 Weak transcription Duodenum Mucosa Duodenum
2 chr3:113001200-113044600 Weak transcription Fetal Kidney kidney
3 chr3:113013600-113065200 Weak transcription Left Ventricle heart
4 chr3:113024600-113046600 Weak transcription Muscle Satellite Cultured Cells --
5 chr3:113024600-113081000 Weak transcription Stomach Smooth Muscle stomach
6 chr3:113028600-113053400 Weak transcription Primary T helper cells PMA-I stimulated --
7 chr3:113034400-113046800 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr3:113034800-113044600 Weak transcription Liver Liver
9 chr3:113034800-113044600 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr3:113034800-113044800 Weak transcription A549 lung
11 chr3:113034800-113048400 Weak transcription Fetal Lung lung
12 chr3:113034800-113053600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr3:113034800-113054000 Weak transcription Psoas Muscle Psoas
14 chr3:113035000-113044600 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr3:113035000-113050800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
16 chr3:113035000-113052000 Weak transcription HSMMtube muscle
17 chr3:113035000-113053000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr3:113035200-113044800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr3:113035400-113044600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr3:113035400-113045000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr3:113035400-113052800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr3:113035800-113046400 Weak transcription Colon Smooth Muscle Colon
23 chr3:113036400-113044600 Weak transcription Brain Anterior Caudate brain
24 chr3:113036400-113053400 Weak transcription Primary T helper naive cells fromperipheralblood blood
25 chr3:113036400-113055600 Weak transcription Primary T killer naive cells fromperipheralblood blood
26 chr3:113036600-113044400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr3:113036600-113044800 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr3:113036600-113049800 Weak transcription Fetal Intestine Large intestine
29 chr3:113036600-113051000 Weak transcription Thymus Thymus
30 chr3:113036600-113081000 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr3:113036800-113046000 Weak transcription Fetal Muscle Trunk muscle
32 chr3:113036800-113050000 Weak transcription Right Ventricle heart
33 chr3:113036800-113050400 Weak transcription Lung lung
34 chr3:113036800-113065600 Weak transcription Aorta Aorta
35 chr3:113036800-113073600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr3:113036800-113081000 Weak transcription Gastric stomach
37 chr3:113036800-113088600 Weak transcription Primary hematopoietic stem cells short term culture blood
38 chr3:113037000-113053600 Weak transcription Primary T helper cells fromperipheralblood blood
39 chr3:113037800-113065600 Weak transcription HSMM muscle
40 chr3:113038600-113044600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
41 chr3:113039400-113044600 Weak transcription Adipose Nuclei Adipose
42 chr3:113040400-113044600 Weak transcription Primary T cells from cord blood blood
43 chr3:113042000-113046200 Weak transcription Brain Hippocampus Middle brain
44 chr3:113042000-113080800 Weak transcription Ovary ovary
45 chr3:113042200-113116800 Weak transcription Primary B cells from cord blood blood
46 chr3:113042400-113044600 Weak transcription Breast Myoepithelial Primary Cells Breast
47 chr3:113042400-113059800 Weak transcription Pancreas Pancrea
48 chr3:113042400-113103600 Weak transcription Sigmoid Colon Sigmoid Colon
49 chr3:113042600-113044600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr3:113043400-113045200 Strong transcription Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015