Variant report
| Variant | rs55759317 |
|---|---|
| Chromosome Location | chr12:44197767-44197768 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:44154200-44199200 | Weak transcription | Gastric | stomach |
| 2 | chr12:44154600-44199000 | Weak transcription | Stomach Mucosa | stomach |
| 3 | chr12:44175000-44199000 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 4 | chr12:44175000-44199000 | Weak transcription | Right Ventricle | heart |
| 5 | chr12:44181800-44199000 | Weak transcription | Aorta | Aorta |
| 6 | chr12:44181800-44199000 | Weak transcription | Esophagus | oesophagus |
| 7 | chr12:44181800-44199200 | Weak transcription | Pancreas | Pancrea |
| 8 | chr12:44182200-44198800 | Weak transcription | Fetal Stomach | stomach |
| 9 | chr12:44182400-44199200 | Weak transcription | Lung | lung |
| 10 | chr12:44182400-44199400 | Weak transcription | Spleen | Spleen |
| 11 | chr12:44182400-44199600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 12 | chr12:44187000-44198400 | Strong transcription | iPS-20b Cell Line | embryonic stem cell |
| 13 | chr12:44187200-44198200 | Strong transcription | iPS-18 Cell Line | embryonic stem cell |
| 14 | chr12:44188600-44198200 | Strong transcription | HUES48 Cell Line | embryonic stem cell |
| 15 | chr12:44188600-44198400 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 16 | chr12:44188800-44197800 | Strong transcription | HSMM | muscle |
| 17 | chr12:44188800-44198000 | Strong transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 18 | chr12:44189000-44198000 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 19 | chr12:44189000-44198200 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 20 | chr12:44189000-44198200 | Strong transcription | Placenta | Placenta |
| 21 | chr12:44189200-44197800 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 22 | chr12:44189400-44198200 | Strong transcription | Primary T cells fromperipheralblood | blood |
| 23 | chr12:44189400-44198200 | Strong transcription | Fetal Thymus | thymus |
| 24 | chr12:44190000-44198800 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 25 | chr12:44190000-44199000 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 26 | chr12:44190200-44199000 | Weak transcription | Colonic Mucosa | Colon |
| 27 | chr12:44190600-44198800 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 28 | chr12:44190600-44198800 | Weak transcription | Brain Hippocampus Middle | brain |
| 29 | chr12:44190600-44199200 | Weak transcription | Small Intestine | intestine |
| 30 | chr12:44191000-44198600 | Weak transcription | Brain Germinal Matrix | brain |
| 31 | chr12:44192000-44198800 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 32 | chr12:44192000-44199000 | Weak transcription | Ovary | ovary |
| 33 | chr12:44192000-44199200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 34 | chr12:44192200-44198000 | Weak transcription | K562 | blood |
| 35 | chr12:44192200-44198800 | Weak transcription | Brain Cingulate Gyrus | brain |
| 36 | chr12:44192200-44198800 | Weak transcription | Thymus | Thymus |
| 37 | chr12:44192800-44198000 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 38 | chr12:44192800-44198800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 39 | chr12:44192800-44198800 | Weak transcription | Stomach Smooth Muscle | stomach |
| 40 | chr12:44192800-44198800 | Weak transcription | HSMMtube | muscle |
| 41 | chr12:44192800-44199000 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 42 | chr12:44194600-44198600 | Weak transcription | NHLF | lung |
| 43 | chr12:44194600-44198800 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 44 | chr12:44194800-44198000 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 45 | chr12:44194800-44198200 | Genic enhancers | Primary T regulatory cells fromperipheralblood | blood |
| 46 | chr12:44194800-44198600 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 47 | chr12:44194800-44198600 | Weak transcription | Fetal Kidney | kidney |
| 48 | chr12:44194800-44198800 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 49 | chr12:44195200-44198600 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 50 | chr12:44195200-44198800 | Weak transcription | Brain Anterior Caudate | brain |
