The 2.0 version of rSNPBase

Variant report

Variant rs55778379
Chromosome Location chr2:73499128-73499129
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:73481800-73510000 Weak transcription K562 blood
2 chr2:73482800-73499200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr2:73485200-73499800 Strong transcription Dnd41 blood
4 chr2:73486000-73501400 Strong transcription Primary hematopoietic stem cells short term culture blood
5 chr2:73491000-73499600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr2:73491200-73504000 Weak transcription Primary B cells from peripheral blood blood
7 chr2:73496800-73499200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr2:73496800-73510400 Weak transcription Ovary ovary
9 chr2:73497000-73504000 Weak transcription Pancreas Pancrea
10 chr2:73497000-73510000 Weak transcription H9 Cell Line embryonic stem cell
11 chr2:73497000-73510200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr2:73497000-73510400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr2:73497000-73510400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr2:73497000-73511000 Weak transcription Gastric stomach
15 chr2:73497200-73501200 Weak transcription Thymus Thymus
16 chr2:73497200-73501200 Weak transcription NHEK skin
17 chr2:73497200-73509800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr2:73497200-73510200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
19 chr2:73497200-73510200 Weak transcription Primary T killer naive cells fromperipheralblood blood
20 chr2:73497200-73510200 Weak transcription Brain Anterior Caudate brain
21 chr2:73497200-73510200 Weak transcription Fetal Thymus thymus
22 chr2:73497200-73510600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
23 chr2:73497400-73501200 Weak transcription Pancreatic Islets Pancreatic Islet
24 chr2:73497400-73504000 Weak transcription GM12878-XiMat blood
25 chr2:73497400-73509600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr2:73497400-73509800 Weak transcription Hela-S3 cervix
27 chr2:73497400-73510000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr2:73497400-73510400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
29 chr2:73497400-73510400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr2:73497400-73511000 Weak transcription Placenta Amnion Placenta Amnion
31 chr2:73497600-73510400 Weak transcription Primary T helper naive cells fromperipheralblood blood
32 chr2:73497600-73510400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr2:73497800-73500200 Strong transcription HepG2 liver
34 chr2:73497800-73510200 Weak transcription Primary T cells fromperipheralblood blood
35 chr2:73497800-73510400 Weak transcription Primary T cells from cord blood blood
36 chr2:73498000-73510200 Weak transcription Primary hematopoietic stem cells blood
37 chr2:73498200-73500600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr2:73498400-73501400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr2:73498400-73510200 Weak transcription Primary monocytes fromperipheralblood blood
40 chr2:73498400-73510200 Weak transcription Monocytes-CD14+_RO01746 blood
41 chr2:73498800-73504000 Weak transcription Primary B cells from cord blood blood

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Last update: Aug 31, 2015