The 2.0 version of rSNPBase

Variant report

Variant rs6546814
Chromosome Location chr2:73505841-73505842
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:73481800-73510000 Weak transcription K562 blood
2 chr2:73496800-73510400 Weak transcription Ovary ovary
3 chr2:73497000-73510000 Weak transcription H9 Cell Line embryonic stem cell
4 chr2:73497000-73510200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr2:73497000-73510400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr2:73497000-73510400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
7 chr2:73497000-73511000 Weak transcription Gastric stomach
8 chr2:73497200-73509800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr2:73497200-73510200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
10 chr2:73497200-73510200 Weak transcription Primary T killer naive cells fromperipheralblood blood
11 chr2:73497200-73510200 Weak transcription Brain Anterior Caudate brain
12 chr2:73497200-73510200 Weak transcription Fetal Thymus thymus
13 chr2:73497200-73510600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr2:73497400-73509600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr2:73497400-73509800 Weak transcription Hela-S3 cervix
16 chr2:73497400-73510000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr2:73497400-73510400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
18 chr2:73497400-73510400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr2:73497400-73511000 Weak transcription Placenta Amnion Placenta Amnion
20 chr2:73497600-73510400 Weak transcription Primary T helper naive cells fromperipheralblood blood
21 chr2:73497600-73510400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr2:73497800-73510200 Weak transcription Primary T cells fromperipheralblood blood
23 chr2:73497800-73510400 Weak transcription Primary T cells from cord blood blood
24 chr2:73498000-73510200 Weak transcription Primary hematopoietic stem cells blood
25 chr2:73498400-73510200 Weak transcription Primary monocytes fromperipheralblood blood
26 chr2:73498400-73510200 Weak transcription Monocytes-CD14+_RO01746 blood
27 chr2:73499800-73510000 Weak transcription HUES48 Cell Line embryonic stem cell
28 chr2:73499800-73510400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
29 chr2:73500800-73510200 Weak transcription Spleen Spleen
30 chr2:73501400-73507600 Weak transcription H1 Cell Line embryonic stem cell
31 chr2:73501400-73510000 Weak transcription Brain Inferior Temporal Lobe brain
32 chr2:73501400-73510600 Weak transcription Pancreatic Islets Pancreatic Islet
33 chr2:73502000-73509600 Weak transcription iPS-15b Cell Line embryonic stem cell
34 chr2:73503800-73510200 Weak transcription Esophagus oesophagus
35 chr2:73504200-73506800 Strong transcription Dnd41 blood
36 chr2:73504200-73509600 Weak transcription Brain Germinal Matrix brain
37 chr2:73504400-73506200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr2:73504400-73510400 Weak transcription Pancreas Pancrea
39 chr2:73504600-73510400 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr2:73505000-73510200 Weak transcription Primary B cells from peripheral blood blood
41 chr2:73505000-73510200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr2:73505000-73510400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr2:73505200-73507600 Weak transcription GM12878-XiMat blood
44 chr2:73505400-73507600 Weak transcription Primary hematopoietic stem cells short term culture blood
45 chr2:73505400-73508000 Weak transcription HepG2 liver
46 chr2:73505400-73510600 Weak transcription Stomach Smooth Muscle stomach
47 chr2:73505800-73507400 Weak transcription Primary B cells from cord blood blood

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Last update: Aug 31, 2015