Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs11947104	1.00[EUR][1000 genomes]
rs17026202	1.00[EUR][1000 genomes]
rs17026210	1.00[EUR][1000 genomes]
rs17026520	0.81[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs17026561	1.00[EUR][1000 genomes]
rs55960153	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs56700848	1.00[AMR][1000 genomes]
rs56761791	1.00[AMR][1000 genomes]
rs57809213	0.97[AFR][1000 genomes]
rs57847518	1.00[AMR][1000 genomes]
rs58009594	0.81[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs58012467	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58199056	0.83[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs60046254	1.00[AMR][1000 genomes]
rs61410366	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6831293	1.00[AMR][1000 genomes]
rs6831945	1.00[AMR][1000 genomes]
rs6847410	1.00[AMR][1000 genomes]
rs73848251	0.81[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73848252	0.81[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73849122	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7681538	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7681934	1.00[EUR][1000 genomes]
rs7686751	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879640	chr4:97711707-98697586	Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv1002766	chr4:98006688-98128416	Enhancers ZNF genes & repeats Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv537192	chr4:98006688-98128416	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:98086200-98089600	Weak transcription	Pancreas	Pancrea

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