Variant report

Variant rs55824950
Chromosome Location chr5:112521491-112521492
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:112504800-112525600 Weak transcription Esophagus oesophagus
2 chr5:112506400-112521600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr5:112507000-112526000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
4 chr5:112514400-112530600 Weak transcription Skeletal Muscle Male skeletal muscle
5 chr5:112515000-112522200 Weak transcription Adipose Nuclei Adipose
6 chr5:112515200-112521600 Weak transcription H1 Cell Line embryonic stem cell
7 chr5:112515200-112526400 Weak transcription Lung lung
8 chr5:112515600-112521800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr5:112515600-112521800 Weak transcription Liver Liver
10 chr5:112515800-112521800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr5:112515800-112530200 Weak transcription Psoas Muscle Psoas
12 chr5:112515800-112538000 Weak transcription Fetal Kidney kidney
13 chr5:112516000-112521800 Weak transcription iPS-20b Cell Line embryonic stem cell
14 chr5:112516400-112524000 Weak transcription Pancreatic Islets Pancreatic Islet
15 chr5:112517600-112525000 Enhancers Ovary ovary
16 chr5:112518600-112525600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr5:112518600-112538600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr5:112518800-112521600 Weak transcription HUES6 Cell Line embryonic stem cell
19 chr5:112519000-112521600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr5:112519600-112521800 Weak transcription Fetal Muscle Leg muscle
21 chr5:112519600-112521800 Weak transcription Right Atrium heart
22 chr5:112519600-112523000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr5:112520400-112524800 Enhancers Cortex derived primary cultured neurospheres brain
24 chr5:112520600-112525800 Enhancers Fetal Heart heart
25 chr5:112520800-112524000 Enhancers Right Ventricle heart
26 chr5:112521000-112522800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
27 chr5:112521000-112522800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr5:112521000-112524400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
29 chr5:112521200-112521800 Enhancers Stomach Smooth Muscle stomach
30 chr5:112521200-112522800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr5:112521200-112523000 Enhancers Brain Germinal Matrix brain
32 chr5:112521200-112524400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
33 chr5:112521400-112522400 Enhancers Brain Angular Gyrus brain
34 chr5:112521400-112522400 Enhancers NHEK skin
35 chr5:112521400-112522600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr5:112521400-112522600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
37 chr5:112521400-112522600 Enhancers HUES64 Cell Line embryonic stem cell
38 chr5:112521400-112522600 Enhancers Breast Myoepithelial Primary Cells Breast
39 chr5:112521400-112522600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr5:112521400-112522800 Enhancers HUES48 Cell Line embryonic stem cell
41 chr5:112521400-112522800 Enhancers iPS-15b Cell Line embryonic stem cell
42 chr5:112521400-112522800 Enhancers iPS-18 Cell Line embryonic stem cell
43 chr5:112521400-112523200 Enhancers Left Ventricle heart

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