Variant report

Variant rs55834900
Chromosome Location chr1:186944770-186944771
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:186881800-186951200 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr1:186919600-186944800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr1:186923400-186958800 Weak transcription Duodenum Mucosa Duodenum
4 chr1:186926800-186951200 Weak transcription Fetal Intestine Small intestine
5 chr1:186935000-186950800 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr1:186935800-186947400 Weak transcription Primary hematopoietic stem cells short term culture blood
7 chr1:186936000-186944800 Weak transcription Breast Myoepithelial Primary Cells Breast
8 chr1:186936000-186949400 Weak transcription Primary hematopoietic stem cells blood
9 chr1:186936200-186948000 Weak transcription Hela-S3 cervix
10 chr1:186936600-186947000 Weak transcription Primary neutrophils fromperipheralblood blood
11 chr1:186937400-186946400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr1:186939200-186950000 Weak transcription A549 lung
13 chr1:186939800-186947600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr1:186943400-186945200 Enhancers NHLF lung
15 chr1:186943400-186946800 Enhancers NH-A brain
16 chr1:186943400-186947200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
17 chr1:186943600-186944800 Weak transcription Fetal Stomach stomach
18 chr1:186943600-186945200 Enhancers Fetal Lung lung
19 chr1:186943600-186948400 Enhancers Colon Smooth Muscle Colon
20 chr1:186943600-186948400 Enhancers Rectal Smooth Muscle rectum
21 chr1:186943800-186948400 Enhancers NHDF-Ad bronchial
22 chr1:186944000-186945600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr1:186944000-186947600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr1:186944200-186945200 Weak transcription Monocytes-CD14+_RO01746 blood
25 chr1:186944200-186945800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr1:186944200-186946800 Enhancers Stomach Smooth Muscle stomach
27 chr1:186944200-186947800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr1:186944400-186944800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr1:186944400-186947400 Weak transcription Primary monocytes fromperipheralblood blood
30 chr1:186944400-186951600 Weak transcription Adipose Nuclei Adipose
31 chr1:186944600-186945000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr1:186944600-186945000 Enhancers Osteobl bone
33 chr1:186944600-186946400 Enhancers HUVEC blood vessel
34 chr1:186944600-186946800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin

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