Variant report

Variant	rs55859018
Chromosome Location	chr5:167459234-167459235
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10039736	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11134483	0.85[ASN][1000 genomes]
rs11134485	0.80[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11955430	0.81[ASN][1000 genomes]
rs12522181	0.85[ASN][1000 genomes]
rs1345735	0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs17069646	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1821254	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1862419	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2546944	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2546957	0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2546960	0.80[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2569047	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2617963	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2617981	0.83[ASN][1000 genomes]
rs889067	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs985650	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs992047	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:167443800-167466000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr5:167447600-167483000	Weak transcription	Right Atrium	heart
3	chr5:167450600-167466600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr5:167450800-167474000	Weak transcription	Left Ventricle	heart
5	chr5:167454600-167463000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr5:167455200-167474600	Weak transcription	NHEK	skin
7	chr5:167457400-167469000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
8	chr5:167457600-167463800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr5:167457800-167465200	Weak transcription	Right Ventricle	heart
10	chr5:167458200-167474200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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