Variant report

Variant rs55860305
Chromosome Location chr19:40830763-40830764
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:40811800-40831600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr19:40815400-40832800 Weak transcription Fetal Brain Male brain
3 chr19:40819200-40834000 Weak transcription Fetal Kidney kidney
4 chr19:40820800-40848400 Strong transcription Dnd41 blood
5 chr19:40821200-40831800 Weak transcription K562 blood
6 chr19:40821400-40835000 Strong transcription Fetal Intestine Small intestine
7 chr19:40821400-40846000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
8 chr19:40822000-40833400 Weak transcription Fetal Heart heart
9 chr19:40822000-40842400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
10 chr19:40822000-40843400 Strong transcription Primary hematopoietic stem cells short term culture blood
11 chr19:40822000-40851000 Strong transcription Fetal Stomach stomach
12 chr19:40822200-40842400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
13 chr19:40822200-40842600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr19:40822200-40843200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr19:40822200-40845400 Strong transcription Fetal Muscle Leg muscle
16 chr19:40822400-40846200 Strong transcription Fetal Muscle Trunk muscle
17 chr19:40823400-40842400 Strong transcription Fetal Brain Female brain
18 chr19:40823400-40845400 Strong transcription Thymus Thymus
19 chr19:40824000-40839400 Strong transcription NHLF lung
20 chr19:40824000-40842200 Strong transcription Liver Liver
21 chr19:40824000-40842400 Strong transcription Brain Germinal Matrix brain
22 chr19:40824000-40842600 Strong transcription Cortex derived primary cultured neurospheres brain
23 chr19:40824200-40846400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr19:40824200-40848600 Strong transcription Primary monocytes fromperipheralblood blood
25 chr19:40824200-40849600 Strong transcription Monocytes-CD14+_RO01746 blood
26 chr19:40824400-40843000 Strong transcription Fetal Thymus thymus
27 chr19:40825200-40836800 Weak transcription Stomach Mucosa stomach
28 chr19:40825200-40842800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
29 chr19:40825400-40842600 Strong transcription Duodenum Mucosa Duodenum
30 chr19:40825600-40835000 Strong transcription Lung lung
31 chr19:40825600-40835600 Strong transcription Brain Cingulate Gyrus brain
32 chr19:40825600-40842200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr19:40825600-40842400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr19:40825800-40833400 Weak transcription Psoas Muscle Psoas
35 chr19:40825800-40835000 Strong transcription Primary T regulatory cells fromperipheralblood blood
36 chr19:40825800-40837400 Strong transcription Colonic Mucosa Colon
37 chr19:40825800-40838600 Strong transcription Brain Hippocampus Middle brain
38 chr19:40825800-40841600 Strong transcription Right Ventricle heart
39 chr19:40825800-40842200 Strong transcription Primary T helper naive cells fromperipheralblood blood
40 chr19:40825800-40842200 Strong transcription Adipose Nuclei Adipose
41 chr19:40825800-40842400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr19:40825800-40842400 Strong transcription Sigmoid Colon Sigmoid Colon
43 chr19:40825800-40842400 Strong transcription Skeletal Muscle Male skeletal muscle
44 chr19:40825800-40842600 Strong transcription Primary T helper cells fromperipheralblood blood
45 chr19:40825800-40842600 Strong transcription Rectal Mucosa Donor 29 rectum
46 chr19:40825800-40845400 Strong transcription Stomach Smooth Muscle stomach
47 chr19:40826000-40830800 Strong transcription Muscle Satellite Cultured Cells --
48 chr19:40826000-40835000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
49 chr19:40826000-40840200 Strong transcription Rectal Mucosa Donor 31 rectum
50 chr19:40826000-40840600 Strong transcription HSMMtube muscle

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