Variant report

Variant	rs55873224
Chromosome Location	chr12:67879371-67879372
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs1066392	1.00[AMR][1000 genomes]
rs1066397	1.00[AMR][1000 genomes]
rs1082703	1.00[AMR][1000 genomes]
rs1082704	1.00[AMR][1000 genomes]
rs1082705	1.00[AMR][1000 genomes]
rs1082706	1.00[AMR][1000 genomes]
rs1143757	1.00[AMR][1000 genomes]
rs1143946	1.00[AMR][1000 genomes]
rs1143955	1.00[AMR][1000 genomes]
rs1152891	1.00[AMR][1000 genomes]
rs1186260	1.00[AMR][1000 genomes]
rs1252363	1.00[AMR][1000 genomes]
rs1252420	1.00[AMR][1000 genomes]
rs1392588	1.00[AMR][1000 genomes]
rs1392589	1.00[AMR][1000 genomes]
rs710799	1.00[AMR][1000 genomes]
rs74099404	1.00[AMR][1000 genomes]
rs74099424	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74099464	1.00[AMR][1000 genomes]
rs775311	1.00[AMR][1000 genomes]
rs775640	1.00[AMR][1000 genomes]
rs775642	1.00[AMR][1000 genomes]
rs775643	1.00[AMR][1000 genomes]
rs775649	1.00[AMR][1000 genomes]
rs775664	1.00[AMR][1000 genomes]
rs812882	1.00[AMR][1000 genomes]
rs812883	1.00[AMR][1000 genomes]

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:67875800-67880400	Enhancers	Primary T cells from cord blood	blood
2	chr12:67875800-67880400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
3	chr12:67876000-67879400	Enhancers	Dnd41	blood
4	chr12:67876000-67880200	Enhancers	Primary T regulatory cells fromperipheralblood	blood
5	chr12:67876000-67880400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
6	chr12:67876000-67880600	Enhancers	Primary T helper naive cells from peripheral blood	blood
7	chr12:67876000-67880600	Enhancers	Primary T helper naive cells fromperipheralblood	blood
8	chr12:67876000-67880600	Enhancers	Primary T helper cells PMA-I stimulated	--
9	chr12:67876000-67880800	Enhancers	Primary T cells fromperipheralblood	blood
10	chr12:67876000-67880800	Enhancers	Primary T helper cells fromperipheralblood	blood
11	chr12:67876000-67881000	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
12	chr12:67876400-67879400	Enhancers	Brain Germinal Matrix	brain
13	chr12:67876400-67879400	Enhancers	Fetal Thymus	thymus
14	chr12:67877000-67879400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr12:67877600-67879400	Enhancers	Sigmoid Colon	Sigmoid Colon
16	chr12:67877600-67880800	Weak transcription	Fetal Intestine Small	intestine
17	chr12:67878000-67880200	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
18	chr12:67878000-67880600	Enhancers	Primary T killer memory cells from peripheral blood	blood
19	chr12:67878400-67879600	Enhancers	GM12878-XiMat	blood
20	chr12:67878600-67879400	Enhancers	Cortex derived primary cultured neurospheres	brain
21	chr12:67878600-67879800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
22	chr12:67878600-67880000	Weak transcription	Primary hematopoietic stem cells	blood
23	chr12:67878800-67880000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
24	chr12:67879000-67879600	Enhancers	Primary T helper 17 cells PMA-I stimulated	--

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