Variant report

Variant rs558950079
Chromosome Location chr11:64001248-64001249
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:63998600-64001400 Enhancers Primary T killer naive cells fromperipheralblood blood
2 chr11:63998600-64001400 Enhancers Lung lung
3 chr11:63998800-64001400 Enhancers Primary B cells from peripheral blood blood
4 chr11:63998800-64001400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr11:63998800-64001400 Enhancers Fetal Thymus thymus
6 chr11:63998800-64001400 Weak transcription Psoas Muscle Psoas
7 chr11:63999400-64001400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr11:63999400-64001400 Weak transcription Osteobl bone
9 chr11:63999400-64007200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
10 chr11:64000200-64001400 Weak transcription Primary T cells from cord blood blood
11 chr11:64000800-64001600 Enhancers Stomach Mucosa stomach
12 chr11:64001000-64001400 Flanking Bivalent TSS/Enh iPS-20b Cell Line embryonic stem cell
13 chr11:64001000-64001400 Bivalent Enhancer Primary neutrophils fromperipheralblood blood
14 chr11:64001000-64001400 Enhancers Primary T helper cells fromperipheralblood blood
15 chr11:64001000-64001400 Enhancers Primary Natural Killer cells fromperipheralblood blood
16 chr11:64001000-64001400 Enhancers Liver Liver
17 chr11:64001000-64001400 Flanking Active TSS Brain Angular Gyrus brain
18 chr11:64001000-64001400 Enhancers Brain Substantia Nigra brain
19 chr11:64001000-64001400 Active TSS Colonic Mucosa Colon
20 chr11:64001000-64001400 Enhancers Gastric stomach
21 chr11:64001000-64001400 Enhancers Rectal Mucosa Donor 31 rectum
22 chr11:64001000-64001400 Enhancers Spleen Spleen
23 chr11:64001000-64001600 Flanking Bivalent TSS/Enh H1 Cell Line embryonic stem cell
24 chr11:64001000-64001600 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
25 chr11:64001000-64001600 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
26 chr11:64001000-64001600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr11:64001000-64001600 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
28 chr11:64001000-64001600 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
29 chr11:64001000-64001600 Flanking Active TSS Brain Hippocampus Middle brain
30 chr11:64001000-64001600 Flanking Active TSS Colon Smooth Muscle Colon
31 chr11:64001000-64001600 Flanking Active TSS Fetal Brain Male brain
32 chr11:64001000-64001600 Flanking Active TSS Fetal Intestine Small intestine
33 chr11:64001000-64001600 Flanking Active TSS Fetal Lung lung
34 chr11:64001000-64001600 Flanking Active TSS Rectal Smooth Muscle rectum
35 chr11:64001000-64001600 Enhancers Sigmoid Colon Sigmoid Colon
36 chr11:64001000-64001600 Flanking Active TSS Hela-S3 cervix
37 chr11:64001000-64001600 Flanking Active TSS HepG2 liver
38 chr11:64001000-64001600 Flanking Active TSS K562 blood
39 chr11:64001000-64001600 Flanking Active TSS NHDF-Ad bronchial
40 chr11:64001000-64001600 Flanking Active TSS NHLF lung
41 chr11:64001000-64001800 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
42 chr11:64001000-64001800 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr11:64001000-64001800 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
44 chr11:64001000-64001800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
45 chr11:64001000-64001800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr11:64001000-64001800 Flanking Active TSS Cortex derived primary cultured neurospheres brain
47 chr11:64001000-64001800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
48 chr11:64001000-64001800 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr11:64001000-64001800 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
50 chr11:64001000-64001800 Flanking Active TSS Adipose Nuclei Adipose

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