Variant report

Variant rs559103794
Chromosome Location chr5:180243851-180243852
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:180238200-180245000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr5:180238600-180244000 Weak transcription HSMMtube muscle
3 chr5:180238600-180244000 Weak transcription NHLF lung
4 chr5:180238800-180253200 Weak transcription A549 lung
5 chr5:180239000-180244000 Weak transcription Placenta Amnion Placenta Amnion
6 chr5:180239000-180244800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr5:180239000-180245400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr5:180239000-180247400 Weak transcription Brain Substantia Nigra brain
9 chr5:180239200-180244000 Weak transcription Pancreas Pancrea
10 chr5:180239200-180244600 Enhancers K562 blood
11 chr5:180239200-180245000 Weak transcription Colon Smooth Muscle Colon
12 chr5:180239200-180247200 Weak transcription Esophagus oesophagus
13 chr5:180240600-180245800 Enhancers Fetal Thymus thymus
14 chr5:180241400-180244200 Enhancers Fetal Muscle Trunk muscle
15 chr5:180241600-180244600 Weak transcription Pancreatic Islets Pancreatic Islet
16 chr5:180241600-180251800 Weak transcription Brain Anterior Caudate brain
17 chr5:180242000-180245000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr5:180242000-180245200 Enhancers Skeletal Muscle Male skeletal muscle
19 chr5:180242000-180245400 Enhancers Primary B cells from peripheral blood blood
20 chr5:180242200-180245000 Enhancers Fetal Kidney kidney
21 chr5:180242200-180245000 Enhancers Skeletal Muscle Female skeletal muscle
22 chr5:180242200-180245600 Enhancers Primary B cells from cord blood blood
23 chr5:180242200-180245600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
24 chr5:180242200-180246000 Enhancers Osteobl bone
25 chr5:180242400-180244000 Weak transcription Spleen Spleen
26 chr5:180242400-180244800 Enhancers Primary T killer memory cells from peripheral blood blood
27 chr5:180242400-180245400 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr5:180242600-180244000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr5:180242600-180244800 Weak transcription Colonic Mucosa Colon
30 chr5:180242600-180245000 Weak transcription Rectal Smooth Muscle rectum
31 chr5:180242600-180245200 Weak transcription Liver Liver
32 chr5:180242600-180245400 Weak transcription Right Ventricle heart
33 chr5:180242600-180246400 Enhancers Fetal Muscle Leg muscle
34 chr5:180242600-180247200 Weak transcription Rectal Mucosa Donor 31 rectum
35 chr5:180242800-180244000 Weak transcription Psoas Muscle Psoas
36 chr5:180242800-180244400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
37 chr5:180242800-180246400 Enhancers Fetal Adrenal Gland Adrenal Gland
38 chr5:180243000-180244600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
39 chr5:180243000-180244600 Enhancers Primary T helper 17 cells PMA-I stimulated --
40 chr5:180243000-180245000 Enhancers Primary T killer naive cells fromperipheralblood blood
41 chr5:180243000-180245600 Enhancers Primary monocytes fromperipheralblood blood
42 chr5:180243000-180251800 Weak transcription Brain Hippocampus Middle brain
43 chr5:180243200-180244600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr5:180243200-180244600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
45 chr5:180243200-180245000 Enhancers Thymus Thymus
46 chr5:180243400-180244000 Flanking Active TSS Primary T cells from cord blood blood
47 chr5:180243400-180244200 Enhancers Primary Natural Killer cells fromperipheralblood blood
48 chr5:180243400-180244200 Flanking Active TSS Adipose Nuclei Adipose
49 chr5:180243400-180244400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
50 chr5:180243400-180244600 Enhancers HUES64 Cell Line embryonic stem cell

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