Variant report

Variant	rs559240749
Chromosome Location	chr10:90017079-90017080
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv467414	chr10:90006507-90042154	Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent Enhancer Genic enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv895879	chr10:90015725-90219298	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:90005800-90017200	Weak transcription	Rectal Mucosa Donor 31	rectum
2	chr10:90014200-90018400	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr10:90014200-90028400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
4	chr10:90014400-90017400	Weak transcription	HUVEC	blood vessel
5	chr10:90014400-90019800	Weak transcription	GM12878-XiMat	blood
6	chr10:90014600-90019800	Weak transcription	Dnd41	blood
7	chr10:90014600-90025600	Weak transcription	Osteobl	bone
8	chr10:90015000-90020200	Weak transcription	HMEC	breast
9	chr10:90015200-90020200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr10:90015600-90017200	Weak transcription	Fetal Intestine Large	intestine
11	chr10:90015800-90018600	Weak transcription	Pancreas	Pancrea
12	chr10:90016600-90017200	Enhancers	Muscle Satellite Cultured Cells	--
13	chr10:90016600-90017200	Enhancers	Skeletal Muscle Male	skeletal muscle
14	chr10:90016600-90017600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
15	chr10:90016600-90017600	Enhancers	Skeletal Muscle Female	skeletal muscle
16	chr10:90016600-90017600	Enhancers	NHDF-Ad	bronchial
17	chr10:90016600-90017600	Enhancers	NHLF	lung
18	chr10:90016800-90017200	Weak transcription	Adipose Nuclei	Adipose
19	chr10:90017000-90017200	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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