Variant report

Variant rs559534874
Chromosome Location chr6:161816753-161816754
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:161780600-161835800 Weak transcription Right Atrium heart
2 chr6:161814400-161817800 Enhancers Skeletal Muscle Female skeletal muscle
3 chr6:161814800-161817800 Enhancers Brain Germinal Matrix brain
4 chr6:161815200-161817000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr6:161815200-161817000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
6 chr6:161815200-161817800 Enhancers Cortex derived primary cultured neurospheres brain
7 chr6:161815400-161816800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
8 chr6:161815400-161816800 Weak transcription Fetal Lung lung
9 chr6:161815400-161816800 Weak transcription Stomach Smooth Muscle stomach
10 chr6:161815400-161817000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr6:161815400-161817200 Enhancers Primary Natural Killer cells fromperipheralblood blood
12 chr6:161815400-161817600 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr6:161815400-161817600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr6:161815600-161817000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr6:161815600-161817000 Weak transcription Psoas Muscle Psoas
16 chr6:161815800-161817200 Weak transcription HMEC breast
17 chr6:161815800-161817600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr6:161815800-161817600 Weak transcription NHEK skin
19 chr6:161815800-161817800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr6:161816200-161818000 Enhancers Fetal Muscle Leg muscle
21 chr6:161816400-161818000 Enhancers Fetal Brain Male brain
22 chr6:161816600-161816800 Enhancers Brain Anterior Caudate brain
23 chr6:161816600-161816800 Flanking Active TSS Skeletal Muscle Male skeletal muscle
24 chr6:161816600-161816800 Enhancers NH-A brain
25 chr6:161816600-161817200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr6:161816600-161817200 Enhancers Fetal Muscle Trunk muscle
27 chr6:161816600-161817400 Enhancers Brain Cingulate Gyrus brain
28 chr6:161816600-161817400 Enhancers Fetal Stomach stomach
29 chr6:161816600-161818000 Enhancers Fetal Brain Female brain

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